sina mobasheri zadeh
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در کشورهای در حال توسعه حضور و تنوع گونه های مختلف استافیلوکوکوس در مواد غذایی به طور گسترده مطالعه نشده است. بنابراین، هدف از انجام این مطالعه بررسی توزیع گونه های استافیلوکوکوس در مواد غذایی متنوع و ارزیابی الگوی حساسیت آنتی بیوتیکی آن ها در شهر اصفهان بود. تعداد 194 نمونه مختلف مواد غذایی از مناطق مختلف شهر اصفهان جمع آوری شد و از نظر وجود گونه های متنوع استافیلوکوکوس مورد بررسی قرار گرفت. آزمایشات فنوتیپی برای جداسازی اولیه و بررسی توالی ژن16SrRNA به منظور شناسایی گونه ها انجام شد. الگوی حساسیت آنتی بیوتیکی نمونه ها با روش انتشار دیسک در سطح آگار نیز مورد بررسی قرار گرفت. از مجموع 194 نمونه مواد غدایی، 92 جدایه (5/47 درصد) کوکسی گرم مثبت شناسایی و جداسازی شد. از این بین، 84 جدایه استافیلوکوکوس، 7 جدایه ماکروکوکوس و یک جدایه میکروکوکوس تشخیص داده شد. بیشترین فراوانی جدایه های استافیلوکوکوس جدا شده مربوط به جدایه های استافیلوکوکوس اوریوس با فراوانی 25 درصد (84/21)، استافیلوکوکوس ویتولینوس 5/15 درصد (84/13) و استافیلوکوکوس سوکسینوس 9/11 درصد (84/10) بود. بیشترین مقاومت نسبت به پنی سیلین (5/ 59 درصد) و تتراسایکلین (2/0 درصد) و کمترین میزان مقاومت در برابر لووفلوکساسین، ریفامپیسین، جنتامایسین و سیپروفلوکساسین تشخیص داده شد. بررسی گونه های استافیلوکوکوس برای تحقیقات اپیدمیولوژی اهمیت دارد. همچنین تشخیص مقاومت آنتی بیوتیکی در گونه های استافیلوکوکی جداشده از مواد غذایی نشان می دهد که مواد غذایی به عنوان یک خطر بالقوه برای سلامتی افراد جامعه و پراکندگی هرچه بیشتر مقاومت آنتی بیوتیکی می باشد. با انجام روش16SrRNA شناسایی گونه های استافیلوکوکوس بهتر انجام می شود تا امنیت مواد غذایی افزایش یابد و از هزینه های درمان اضافی جلوگیری شود.
کلید واژگان: استافیلوکوکوس, مواد غذایی, مقاومت آنتی بیوتیکی, بررسی توالی .DNAIn developing countries, the presence and diversity of Staphylococcus species in foodstuffs have not been comprehensively studied. So, the present study aimed to investigate the dissemination of Staphylococcus spp. and their antimicrobial susceptibility pattern isolated from foodstuffs in Isfahan in 2015-2016. A total of 194 foodstuff samples were collected from different parts of Isfahan city and processed for the presence of Staphylococcus spp. The conventional tests were used for the primary detection of bacteria and the sequence analysis of 16S rRNA was used for the species identification. The antimicrobial susceptibility pattern of isolates was determined by the disk diffusion method. From a total of 194 food samples, 92 Gram-positive cocci (47.5%) were isolated. Of them, 84 isolates were Staphylococcus spp., 7 Macrococcus spp and one Micrococcus spp. The most prevalent species were S. aureus 25% (21/84), S. vitulinus 15.5% (13/84) and S. succinus sub casei 11.9% (10/84). The most antibiotic resistance rates were against penicillin (59/5%) and tetracycline (20.2%) while the lowest antibiotic resistance rates were observed for levofloxacin, rifampicin, gentamicin, and ciprofloxacin. Characterization of Staphylococcus species is important for epidemiological investigations. Proper identification and management practices including analysis of 16S rRNA for the species identification should be considered to increase food safety and prevent extra treatment costs.
Keywords: Staphylococcus, foodstuff, Antibiotic resistance, DNA sequence analysis -
Background
Antibiotic resistance against uro-pathogens is a worldwide health concern. The aim of this study was to determine the causative bacteria and antibiotic susceptibility patterns among hospitalized patients with community acquired urinary tract infection (UTI).
MethodsThis cross-sectional study was performed in 2016-2018 in Isfahan, Iran. Urine samples were examined for strain identification and antimicrobial resistance pattern using standard tests. Stratification was done based on gender and age (<20 and >20 years) groups. Chi-square and Fisher exact tests were applied to assess differences in etiology and susceptibility rates between groups.
ResultsAmong 1180 patients, Escherichia coli was the commonest pathogen (68.1%) followed by Enterococcus spp. (8.8%) and Klebsiella pneumonia (8.0 %). Non-E. coli pathogens were more frequent among males (41.8% versus 24.8% in females, P<0.01) and in those aged under 20 years (61.0% versus 22.2% in older than 20 years, P<0.01). Isolated bacteria revealed high susceptibility to imipenem (94.9%), meropenem (92.2%), and amikacin (91.9%); moderate sensitivity to gentamicin (64.4%), cefepime (52.6%) and ceftazidime (47.2%); and low susceptibility to ceftriaxone (41.8%), cefotaxime (40.0%), ciprofloxacin (38.6%) and trimethoprim-sulfamethoxazol (31.3%). The sensitivity of isolates to ceftriaxone, ceftazidime, cefepime, imipenem, meropenem, amikacin and ciprofloxacin was significantly higher in females. Compared to the older age group, uro-pathogens were more susceptible to ciprofloxacin, ceftazidime and gentamicin in patients aged under 20 years.
ConclusionWe found that imipenem, meropenem and amikacin were good choices for empiric therapy of complicated or severe hospitalized patients with community acquired UTI; and gentamicin, cefepime and ceftazidime were acceptable as initial choices in non-severe infections in the area.
Keywords: Antimicrobial susceptibility, Community acquired, Hospitalized, Infection, Iran, Urinary tract -
Background
Methicillin‑resistant Staphylococcus aureus (MRSA) has become a considerable public health concern in the entire world due to the rapid spread of this bacterium in human community; also the epidemiology of MRSA has changed, as the isolation of MRSA strains from healthy and non‑healthy patients. Therefore, the objective of this study is to determine the genetic diversity and antibiotic resistance profile of community‑acquired (CA)‑MRSA nasal carriage in the Iranian samples.
Materials and MethodsA total of 25 CA‑MRSA were isolated from the anterior nares of 410 healthy preschool children. All MRSA isolates were characterized by the detection of the toxic shock syndrome toxin‑1 (TSST‑1) and typed by γ‑hemolysin genes, agr groups, and staphylococcal protein A (spa) typing. Kirby‑Buyer antibiotic susceptibility testing was performed and interpreted as per the standard guidelines.
ResultsA total of 25 (6.1%) MRSA isolates were recovered from the anterior nares of 410 preschool children. Sixteen isolates (64%) were positive for the TSST‑1 gene. Three agr specificity groups were determined, as follows: eight (32%) isolates belonged to agr Group I, five (20%) isolates belonged to agr Group II, and 12 (48%) isolates belonged to agr Group III. The repeated profiles of these spa types of 25 isolates were organized into eight different lineages groups. Five of lineages contained a single strain, three of lineages contained two strains, and three of lineages consisted of more than three strains.
ConclusionsThe results of our study show that the rate of MRSA in our region is significantly high. Additionally, spa type t037 was the predominant type among CA S. aureus.
Keywords: Agr protein, Methicillin-resistant Staphylococcus aureus, staphylococcal protein A, toxicshock syndrome toxin 1 -
Background
Staphylococcus aureus (S. aureus) is one of the most important pathogens in burn infections colonized in the nose and increase the risk of infections.
MethodsOverall, 85 S. aureus isolates were isolated from clinical and nasal hospitalized patients and health care workers (HCWs) in a burn unit and non-burn units in Isfahan from June 2016 and September 2016. Genes encoding penicillin-binding protein 2a (mecA) and adhesive surface proteins, including fibronectin-binding proteins (fnbA, fnbB), fibrinogen binding protein (fib), laminin-binding protein(eno), collagen binding protein (cna), elastin binding protein (ebps), intracellular adhesion operon (icaA and icaD) were detected using PCR method.
ResultsThe rate of methicillin-resistant S. aureus (MRSA) among burn and non-burn isolates were 62% (18/29) and 25% (14/56), respectively. The most prevalent MSCRAMMs genes in burn units were eno (86%) and fib (66%). The most common gene pattern in burn center was icaA+fib+eno. The frequency of icaD, fib and ebpS was higher in clinical samples than nasal samples. No relation was found between the MSCRAMMs genes in the burn unit and non-burn units.
ConclusionThe high prevalence of MRSA in burn center can be a new challenge for clinicians. The higher frequency of icaD, fib and ebpS in clinical isolates than nasal isolates may reflect the important role of these genes in colonization and pathogenesis of S. aureus.
Keywords: Staphylococcus aureus, Methicillin-resistant S. aureus, Surface proteins, Proteins -
Background
Isfahan Antibiotic Resistance Surveillance System‑1 has been instituted in Isfahan, Iran to construct a project for surveillance of clinically significant bacteria, and to help raise a logic regional stewardship program for prevention and control of disseminating‑resistant organisms.
MethodsDuring March 2016 to March 2018, an antibiotic resistance surveillance system was designed and implemented by Isfahan Infectious Diseases and Tropical Medicine Research Center. The surveillance program was implemented in three general hospitals in Isfahan. In addition to the routine microbiology data, clinical data (differentiation between true infections and contamination, healthcare‑associated infections (HCAI) and community‑acquired infections (CAI), as well as determination of the infection site) were obtained and analyzed by WHONET software.
ResultsDuring a 2‑year period, from 7056 samples that revealed growth of bacteria, 3632 (51.5%) isolates were detected as contamination and 3424 (48.5%) true bacterial isolates were identified. Of these, about 32% of isolates were recognized as HCAI. Totally, the most recognized infections were urinary tract infection, bloodstream infection and skin and soft tissue infections. In patients with HCAIs, 70% of isolates were gram negative and in patients with CAIs 73% isolates were gram negative bacteria.
ConclusionsThe strength of the project is gathering enough clinical information in addition to microbiologic data, which would increase application of the results for empiric treatment and prevention of the infectious diseases in clinical settings.
Keywords: Bacteria, drug resistance, epidemiology, Iran, methods -
Background And ObjectivesStaphylococcus aureus is an important pathogen that can be colonized in the nose and increase the risk of spreading infections in hospitals. The present study aimed at determining the phenotypic and genotypic characterization of S. aureus strains isolated from patients and healthcare workers (HCWs) from a teaching hospital in Isfahan, Iran.Materials And MethodsThis cross-sectional study was performed on 262 nasal swabs and 23 clinical isolates that were collected from a teaching hospital during February and April 2016. Staphylococcal cassette chromosome mec (SCCmec) and multilocus sequence typing (MLST) were performed for selected isolates.ResultsOverall, 23% and 18% of healthcare workers and patients were carriers, respectively. Methicillin-resistant S. aureus (MRSA) rate was 13%, 33% and 52% in nasal HCWs, nasal patients, and clinical samples, respectively. The molecular typing of MRSA isolates revealed that the most common SCCmec type is SCCmec type III (88%). The highest rate of resistance was observed against tetracycline and erythromycin, with 48.7%. The most frequently detected toxin genes among S. aureus isolates were hla (99%) and sea (44%), moreover, pvl genes were detected in (40%) of MRSA isolates. The results of MLST showed 7 different sequence types (STs): ST859 (2/9), ST6 (2/9), ST639 (1/9), ST343 (1/9), ST239 (1/9), ST291 (1/9) and ST25 (1/9).ConclusionOur results revealed that ST clones associated with healthcare-associated MRSA (HA-MRSA) are actively circulating among nasal carriage in our healthcare setting, and thus, effective infection control policies are needed to reduce nasal carriage in healthcare settings.Keywords: MRSA, MLST, Nasal carrier, SCCmec typing
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Background
Escherichia coli is a Gram‑negative, opportunistic human pathogen in which increasing antibiotic resistance is a great concern for continued human survival. Although biofilm formation is a mechanism that helps E. coli to survive in unfavorable conditions, according to the importance of biofilm formation in developing the antibiotic resistance here, we studied the relation between antibiotic resistance and in vitro qualitative rating method biofilm formation in E. coli isolated from patients with urinary tract infection (UTI).
Materials and MethodsThe clinical isolates of E. coli (n = 100) were collected from urine of patients with UTI attending Isfahan Alzahra hospital. The strains were confirmed as E. coli using biochemical tests and molecular method. The Kirby‑Bauer disk diffusion tests were done according to the Clinical and Laboratory Standards Institute protocol, and the biofilm synthesis was performed by microplate method. The binary logistic test was applied and P < 0.05 was considered statistically significant.
ResultsOur results showed a high outbreak of multidrug‑resistant (MDR) E. coli strains (73%) and the highest resistance was observed toward ampicillin. The prevalence of biofilm producer isolates was 80% that 29% produced strong biofilm. The distribution of non‑MDR isolates was high among strong biofilm producers, which shows a significant negative correlation between biofilm production and MDR pattern (P < 0.001).
ConclusionsWe found a negative correlation between MDR phenotype and biofilm formation capacity. This transmits the concept that more antibiotic susceptibility of strong biofilm producers may be due to the reduced exposure to multiple antibiotics.
Keywords: Antibiotic resistance, biofilm formation, Escherichia coli, urinary tract infections -
Background
Extended‑spectrum β‑lactamase (ESBL)‑producing is a significant resistant mechanism to β‑lactams in Enterobacteriaceae, especially in Klebsiella pneumoniae. The main objectives of this study were to genetically characterize urinary clinical isolates of K. pneumoniae through the investigating of blaTEM, blaCTX‑M and using molecular typing by Enterobacterial repetitive intergenic consensus polymerase chain reaction (ERIC‑PCR) method. We also determined the frequency of antibiotic resistance of K. pneumoniae strains to characterize the β‑lactamases included.
Materials and MethodsA cross‑sectional study was carried out to evaluate 98 strains of K. pneumoniae isolated from urine culture of outpatients referred to Al‑Zahra Hospital, Isfahan, Iran. Antibiotic susceptibility testing was performed using Kirby–Bauer’s method. Screening of ESBLs was carried out using double‑disk screening test. PCR technique was performed to detect TEM and CTX‑M genes. The total DNA of each strain was tested by ERIC‑PCR.
ResultsIn 98 K. pneumoniae studied clinical isolates, 25.5% were ESBL producing and 44.9% multidrug‑resistant (MDR). From 25 ESBL isolates, 23 (92%) cases showed MDR phenotype. In ESBL producing isolates, 23 (92%) were blaCTX‑M and 19 (76%) blaTEM positive. The antimicrobial drug susceptibilities of ESBL isolates indicated high resistant rates for cefotaxime and ceftazidime. All 25 ESBL producing isolates were resistant to cefotaxime. Complex patterns of fingerprints isolates showed that 36% of the isolates were belonged to the cluster no 5.
ConclusionThis study revealed high antimicrobial resistance rates among ESBL isolates which can lead to various health difficulties. Epidemiological data collection from patients is recommended to develop the strategies to manage antibiotic resistance.
Keywords: Antimicrobial resistance, blaCTX‑M, blaTEM, Klebsiella pneumoniae, multidrug‑resistant -
Background And ObjectivesMacrolide, lincosamide and streptogramin B (MLSB) are noteworthy antibiotics for the treatment of Staphylococcus aureus infections. The purpose of this study, was to determine the phenotypic and genotypic characterization of macrolide resistance, among S. aureus, isolated from clinical samples and nasal swabs.Materials And MethodsTotally, 162 non-duplicate S. aureus isolates were collected from clinical samples and nasal swabs, from patients and healthcare workers (HCWs), between March 2016 and September 2016, at four teaching hospitals in Isfahan. The antibiotic resistance profile was determined using disk diffusion test and the presence of resistance genes was detected, using PCR.ResultsOf 162 S. aureus isolates, 43.8% (71/162) and 34% (55/162) isolates were erythromycin-resistant and methicillin-resistant S. aureus (MRSA), respectively. The prevalence of constitutive MLSB (cMLSB), inducible MLSB (iMLSB), macrolide-streptogramin B-resistant (MSB) and lincosamide-streptogramin-A resistance (LSA) phenotype was 32%, 6%, 6% and 2%, respectively. The most common erythromycin resistance genes, in S. aureus isolates were ermC (35.2%), followed by ermA (20.4%) and msrA (17.3%). Meanwhile, msrA was detected in 43.6% of MRSA isolates. The frequency of coexistence of ermA窹苺欫, in S. aureus isolates was 7% and it was only detected in MRSA isolates.ConclusionIn the current study, cMLSB phenotype was the most common erythromycin resistance pattern and ermC was the most prevalent gene in erythromycin-resistant isolates. The results revealed that the various mechanisms of erythromycin resistance are expanding in Isfahan.Keywords: Staphylococcus aureus, Inducible resistance, D-test, erm A, ermC, msrA
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BackgroundThis study was to evaluate the prevalence of CTX-Mand TEM type ESBLs-producing K. pneumoniae and determination of MDR, XDR, and PDR phenotypes of these isolates as well as find out the genetic relationship and molecular typing of these isolates using phenotypic and genotypic methods.MethodsNon-repetitive 96 K. pneumonia isolates were isolated from hospitalized patients in Al-Zahra hospital of Isfahan, Iran. The antibiotic susceptibility test was assessed for 20 antibiotics using Kirby-Bauer disk diffusion method. The frequency of ESBL-producing isolates was determined by phenotypic confirmatory test. All ESBLs-producing isolates were assessed for blaTEM and blaCTX-M genes using PCR method. Molecular typing was performed by enterobacterial repetitive intergenic consensus sequence-based PCR (ERIC-PCR).ResultsAmong 96 isolates, 58 isolates (60.4%) were ESBL-producers. In this study, 85.7% and 30.3% of ESBL-producing isolates showed MDR and XDR phenotypes, respectively. No PDR isolate was found. PCR amplification on ESBL-producing isolates showed that 47 (81%) isolates were carried blaTEM gene, while blaCTX-M was detected in all isolates (100%). ERIC-PCR typing was characterized the high genetic similarity among ESBL-producing K. pneumonia isolates and revealed 32 band pattern for the isolates.ConclusionThis study showed high prevalence of important ESBL genes (blaCTX-M and blaTEM genes) among the K. pneumoniae isolated from in-patients. Constant following of ESBLs, also identification of their types, in bacteria isolated from hospitalized patients has an important clinical impact. It can provide valuable information for the choice of appropriate antibacterial therapy and decrease of antibiotic resistance.Keywords: Klebsiella pneumoniae, MDR, ESBLs, TEM, CTX-M, ERIC-PCR
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Background
The rapid emergence and spread of community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) has raised considerable public health concern in both developed and developing countries. The current study aimed to address the extent of this phenomenon in healthy preschool children of a developing country.
Materials and MethodsWe conducted a prospective study from April 2013 to March 2014 on 410 healthy 2-6 years old preschool children in Isfahan, Iran. Demographic medical data and nasal samples were collected from the participating children. Isolates were identified as S. aureus and MRSA based on microbiological and molecular tests, including the presence of eap and mecA genes.
ResultsThe overall prevalence of S. aureus and CA-MRSA nasal carriage was 28% (115/410) and 6.1% (25/410), respectively. The identity of isolates was confirmed by molecular assay. The factors that were independently associated with nasal carriage of S. aureus were: Children crowding in day-care nurseries and income level of families. A total of 20/90 (22.2%) of methicillin-susceptible S. aureus and all 25 CA-MRSA displayed multiple drug resistance to 3–8 antibiotics.
ConclusionsThe current report reflects issues and concerns that the high rate of colonization by CA-MRSA in Iranian healthy children provides obliging evidence that MRSA have established a foothold in the community and are emerging as important health threatening pathogens. It is suggested that we need more effective infection control measures to prevent transmission of nasal CA-MRSA in healthy preschool children
Keywords: Community acquired, drug resistance, methicillin-resistant Staphylococcus aureus, Staphylococcus aureus -
Background
Methicillin‑resistant Staphylococcus aureus (MRSA) is a frequent cause of infections. The changing epidemiology of MRSA became evident in the 1990s when CA‑MRSA cases were first reported. Nasal carriage of CA‑MRSA is associated with an increased risk for development of infections in various populations.
Materials and MethodsAnterior nares culture for the presence of methicillin‑susceptible Staphylococcus aureus (MSSA) and MRSA was taken from 345 children attending kindergartens, who didn’t have any known risk factor for MRSA colonization. Also, children demographic variables were recorded. Identification of SA and community‑acquired methicillin‑resistant Staphylococcus aureus (CA‑MRSA) with standard microbiological test was performed. Finally, the susceptibility of isolated to various antibiotics determined. The data were analyzed with Whonet 5.6 software.
ResultsOf 345 children, 20 children (5.8%) were colonized with CA‑MRSA, 86 children (24.9%) with MSSA and 239 cases (69.3%) didn’t have SA colonization. The highest rate of MSSA and MRSA colonization was obtained at the age of 6 years. The frequency distribution of SA (MSSA and MRSA) colonization prevalence didn’t have any significant differences based on age, gender and the admission time (P > 0.05); but it was significantly different in the urban areas (P < 0.001). The lowest resistance rate of CA‑MRSA isolates, with a frequency of 10%, was detected with gentamicin, rifampin, and trimethoprim‑sulfamethoxazole.
ConclusionsIn summary, CA‑MRSA colonization was observed in child care centers remarkably. Therefore, by facing various infections due to SA especially in areas of low socio‑economic status, it must be considered. Based on antibiogram test, empirical treatment with rifampin, gentamicin and ciprofloxacin is recommended during CA‑MRSA infections.
Keywords: Community‑acquired, methicillin‑resistant Staphylococcus aureus, methicillin‑resistant Staphylococcus aureus, methicillin‑susceptible Staphylococcus aureus -
مقدمهافزایش شیوع بتا لاکتامازهای گروه CTX-M در جهان در برخی از پاتوژن های گرم منفی باعث نگرانی جامعه ی پزشکی شده است. هدف از این مطالعه، بررسی فراوانی نسبی باکتری های Escherichia coli تولید کننده ی بتا لاکتاماز وسیع الطیف (ESBL یا Extended-spectrum beta-lactamase)، فراوانی ژن CTX-M و الگوی مقاومت آنتی بیوتیکی در بیماران مبتلا به عفونت های ادراری ناشی از باکتری Escherichia coli در دو گروه بیمارستانی و سرپایی در شهر اصفهان در سال 1392 بود.روش هااین مطالعه بر روی 120 نمونه ی باکتری Escherichia coli جدا شده از بیماران سرپایی و بستری مبتلا به عفونت ادراری انجام شد. جهت تعیین حساسیت آنتی بیوتیکی، از روش Disc diffusion استفاده شد. سویه های تولید کننده ی ESBL با استفاده از روش Combined disc تایید شد و با روش PCR (Polymerase chain reaction) از نظر ژن CTX-M مورد بررسی قرار گرفتند. از نرم افزار WHONET 5.6 و آزمون Excel جهت واکاوی داده ها استفاده شد.یافته هااز مجموع 120 سویه ی Escherichia coli، به ترتیب در گروه های سرپایی و بستری، 12 مورد (0/20 درصد) و 33 مورد (0/55 درصد) ESBL مثبت بودند. مقاومت به آمپی سیلین و کوتریماکسازول در گروه سرپایی به ترتیب 4/84 و 1/60 درصد و در گروه بستری 9/94 و 8/84 درصد گزارش شد. با استفاده از روش PCR، مشخص شد که 30 سویه، واجد ژن CTX-M بودند.نتیجه گیریتولید ESBL در ایزوله های بیمارستانی، تهدید بزرگی برای مصرف آنتی بیوتیک های وسیع الطیف است. با توجه به حضور ژن CTX-M در درصد بالایی از این سویه ها، مطالعات بیشتر ملکولی و اپیدمیولوژیک در محیط های درمانی ضروری می باشد.
کلید واژگان: عفونت ادراری, Escherichia coli, CTX, M, بتا لاکتاماز وسیع الطیفBackgroundExtended-spectrum beta-lactamase of CTX-M-type is considered as an important mechanism resistant to beta-lactam drugs in the gram-negative pathogens. In this study, the prevalence of extended-spectrum beta-lactamase (ESBL)-producing Escherichia coli (E. coli) as well as the frequency of CTX-M genes from urinary tract infections in inpatients and outpatients caused by Escherichia coli in selected health centers in Isfahan, Iran, was studied in 2013.MethodsThe study was carried out on 120 E. coli isolates from inpatients and outpatients with urinary tract infection. The susceptibility of isolates was tested using disc diffusion method. The ESBL-producer strains were confirmed using combined discs method. Finally, the blaCTX-M gene was determined in ESBL-producer isolates using polymerase chain reaction (PCR) method. To identify the strains of E. coli producing CTX-M genes, PCR method was used. The collected data were entered and analyzed in WHONET 5.6 and Excel softwares.FindingsFrom 120 strains of E. coli, 12 outpatient (20.0%) and 33 inpatient (55.0%) isolates were ESBL-producer. 84.4% and 60.1% of outpatient isolates and 94.9% and 84.8% of inpatient isolates showed resistance to ampicillin and co-trimoxazole, respectively. PCR analysis revealed that 30 isolates had CTX-M gene.ConclusionThe production of ESBL, in particular in isolates of inpatients, is a big threat for use of the broad-spectrum cephalosporins. Given the presence of CTX-M gene in the high proportion of the isolates, more molecular and epidemiological studies on pathogenic bacteria in health centers is required to be able to have a common plan to control bacterial resistance.Keywords: Urinary tract infection, Escherichia coli, CTX, M, ESBL -
سابقه و هدف
مقاومت باکتری های خانواده انتروباکتریاسه به داروهای کارباپنم در حال افزایش می باشد. این مطالعه با هدف بررسی فراوانی مقاومت به داروهای کارباپنم در باکتری های انتروباکتر و اشریشیاکلی مقاوم به چند دارو (MDR)، تعیین الگوی استاندارد مقاومت آنتی بیوتیکی و بررسی فراوانی آنزیم کارباپنماز (KPC) در این سویه ها انجام شد.
مواد و روش هااین مطالعه به صورت مقطعی-توصیفی بر روی 300 نمونه بالینی جمع آوری شده از سه بیمارستان شهر اصفهان انجام شد. الگوی حساسیت آنتی بیوتیکی باکتری ها با روش انتشار دیسک تعیین گردید. در سویه های مقاوم به کارباپنم ها کمترین غلظت ممانعت کننده رشد (MIC) با روش E-test برای ایمی پنم و مروپنم محاسبه شد. مقاومت نسبت به 31 آنتی بیوتیک مختلف از 17 کلاس آنتی بیوتیکی بررسی گردید. فراوانی سویه های MDR، مقاوم دارویی گسترده (EDR) و مقاوم دارویی همه جانبه (PDR) تعیین گردید. همچنین در این سویه ها میزان مقاومت آنزیم KPC با روش فنوتیپی بررسی شد.
یافته هادر مجموع 191 سویه اشریشیاکلی و 43 سویه انتروباکتر جداسازی شدند که به ترتیب 151 (79 درصد) و 35 (81 درصد) مورد از آنها MDR بودند. موثرترین آنتی بیوتیک ها در هر دو باکتری شامل کارباپنم ها، تازوسین، آمیکاسین، سفپیم و نیتروفورانتویین بودند. 5 سویه اشریشیاکلی (3.3 درصد) و 3 سویه انتروباکتر (8.6 درصد) غیرحساس به کارباپنم ها بودند و نتایج MIC تاییدکننده آن بود. از این 8 سویه مقاوم، 7 سویه MDR بودند و تنها یک سویه اشریشیاکلی به عنوان XDR شناخته شد. هیچ سویه PDR مقاوم به تمامی آنتی بیوتیک ها وجود نداشت. آنزیم KPC در 4 سویه (2.6 درصد) اشریشیاکلی و 2 سویه (5.7 درصد) انتروباکتر مثبت بود.
نتیجه گیریمطالعه حاضر نشان دهنده فراوانی بسیار بالای سویه های MDR در میان بیماران بستری در بیمارستان های شهر اصفهان بود. این امر نیاز فوری به بازنگری و اصلاح الگوی مصرف آنتی بیوتیک ها در این بیمارستان ها را نشان می دهد.
کلید واژگان: اشریشیاکلی, انتروباکتر, کارباپنم ها, کلبسیلا نمونیه کارباپنماز (KPC)Background & ObjectivesThe antibiotic resistant of In Enterobacteriaceae bacteria family to carbapenem drugs is continuously increasing. The aims of this study were to determine the prevalence of carbapenems resistance in multidrug-resistant (MDR) strains of E. coli and Enterobacter and to determine their standard antibiotic resistance patterns and frequency of Klebsiella pneumoniae carbapenemase (KPC) enzyme in Isfahan.
Materials & MethodsThis cross-sectional study, was carried out on 300 clinical samples collected from three hospitals in Isfahan. Antibiotic susceptibility of bacteria was determined by disk diffusion method. In carbapenem resistant strains, the minimum inhibitory concentration (MIC) of imipenem and meropenem were calculated by E-test. The resistance rate to 31 antibiotics belonging to 17 classes were evaluated. The frequency of MDR, extended drug resistance (EDR) and pan drug resistant (PDR) strains were determined. The prevalence of the KPC enzyme in these strains was determined by phenotype method.
ResultsTotally, 191 strains of E. coli and 43 Enterobacter strains were isolated, among them 151 (79%) and 35 (81%) were MDR respectively. In both bacteria, effective antibiotics were carbapenem, piperacillin/tazobactam, amikacin, cefepime and nitrofurantoin. Five strains of E. coli (3.3%) and three strains of Enterobacter (6.8%) were resistant to carbapenems and the MIC results confirmed these results. Overall 7 strains out of these 8 strains were MDR and only one strain of E. coli was XDR. No PDR strain was detected. KPC enzymes in four E. coli strains (6.2%) and two strains (7.5%) belonged to Enterobacter strains.
ConclusionThis study demonstrated the high prevalence of MDR among hospitalized patients in Isfahan. This results shows the emergent changes in the level of antibiotic utilization in hospitals.
Keywords: Escherichia coli, Enterobacter, Carbapenem, Klebsiella pneumoniae carbapenemase (KPC) -
BackgroundExtended-spectrum beta-lactamases (ESBLs) are a group of enzymes that hydrolyze antibiotics, including those containing new cephalosporins, and they are found in a significant percentage of Escherichia coli and Klebsiella pneumoniae strains. With the widespread use of antibiotics, difficulties with infection therapy caused by drug resistant organisms, especially those that have acquired resistance to beta-lactams, such as broad-spectrum cephalosporins, have amplified the above-mentioned organisms..ObjectivesThis study was conducted to characterize ESBLs among E. coli and K. pneumonia isolates by molecular and phenotypic methods..Materials And MethodsDifferent strains of E. coli and K. pneumonia were collected from patients with urinary tract infections. The ESBL phenotype was determined by a double disk diffusion test (DDDT). In addition, polymerase chain reaction (PCR) analysis specific for β-lactamase genes of the TEM and SHV family was carried out. The PCR products were run on agarose and examined for DNA bands..ResultsA total of 245 E. coli and 55 K. pneumonia strains were isolated from different samples. In total, 128 of the 300 isolates were confirmed as potential ESBLs producers as follows: 107 (43.67%) E. coli and 21 (38.18%) K. pneumonia. ESBLs genes were found in 24 isolates (18.75%): 21 E. coli and 3 K. pneumonia isolates. The TEM gene was present in 13 (12.14%) E. coli strains, but it was not detected in K. pneumonia. In addition, the SHV gene was present in 8 (7.47%) E. coli and 3 (14.28%) K. pneumonia isolates. Five (4.67%) of the E. coli isolates harbored both TEM and SHV genes. All isolates (100%) were susceptible to imipenem. The lowest rates of resistance to other antibiotics were observed for; piperacillin-tazobactam (6.25%), amikacin (12.5%) and gentamicin (14.84%). The rates of resistance to other antibiotics were as follow: nitrofurantoin (16.4%), nalidixic acid (23.43), co-trimoxazole (25%), cefepime (32%), ciprofloxacin (55.46%), ampicillin (69.53%), ceftazidime (100%), and cefotaxime (100%)..ConclusionsThe results of this study indicate the widespread prevalence of ESBLs and multiple antibiotic resistance in E. coli and K. pneumoniae. Therefore, beta-lactam antibiotics and beta-lactamase inhibitors or carbapenems should be prescribed based on an antibacterial susceptibility test..Keywords: Phenotypic, Molecular, extended, spectrum ?, lactamase (ESBL), Escherichia coli, Klebsiella pneumonia
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BackgroundThe aim of this ex vivo study was to compare the antimicrobial effect of triantibiotic paste, 0.2% chlorhexidine gel, Propolis and Aloe vera on Enterococcus faecalis in deep dentin.Materials And MethodsNinety fresh extracted single-rooted teeth were used in a dentin block model. Seventy-fi ve teeth were infected with E. faecalis and divided into four experimental groups (n = 15). Experimental groups were treated with triantibiotic mixture with distilled water, 0.2% chlorhexidine gel, 70% ethanol + Propolis and Aloe vera. Fifteen teeth treated with distilled water as the positive control and 15 samples, free of bacterial contamination, were considered as the negative control. Gates- Glidden drill #4 was used for removal of surface dentin and Gates-Glidden drill #5 was used to collect samples of deep dentin. The samples were prepared and colony-forming units were counted. Data were analyzed by one-way ANOVA and post hoc Tukey tests. Statistical signifi cance was defi ned at P < 0.05.ResultsTriantibiotic mixture group exhibited the least bacterial growth. However, the rate of bacterial growth showed no signifi cant differences between chlorhexidine and Propolis groups (P > 0.05). Aloe vera had antibacterial effects on E. faecalis, but in comparison with other medicaments, it was less effective (P < 0.05).ConclusionThis experimental study showed that triantibiotic mixture, 0.2% chlorhexidine gel, Propolis and Aleo vera were relatively effective against E. faecalis. All the intracanal medicements had similar effects on E. faecalis in deep dentin except for Aloe vera.Keywords: Aloe vera, chlorhexidine gel, Enterococcus faecalis, intracanal medicaments, propolis, triantibiotic mixture
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Background
Production of β-lactamase enzymes is the most common and important mechanism of resistance in Gram-negative bacteria. Th e objective of this study was to assess frequency of three main β-lactamase enzymes, including extended spectrum β-lactamases (ESBLs), metallo-β-lactamase (MBL), and Klebsiella pneumoniae carbapenemase (KPC) enzymes in Escherichia coli and Klebsiella spp. isolated from nosocomial and community urinary tract infections (UTI).
Materials and MethodsIn a cross-sectional study from March to December 2012, midstream urine samples were obtained from patients suspicious of UTI who were hospitalized or referred to Al-Zahra Hospital, Isfahan, Iran. Samples were cultured and E. coli and Klebsiella spp. were isolated. Prevalence of ESBLs, KPC, and MBLs producing E. coli and Klebsiella spp. were studied by double-disk (combined-disk), the modifi ed Hodge test and imipenem-ethylenediaminetetraacetic acid combined disc methods respectively. In addition, their antimicrobial susceptibility patterns determined and resistant to carbapenem drugs confi rmed by minimum inhibitory concentrations based on E-test method.
ResultsA total of 1080 E. coli and 484 Klebsiella strains were isolated during study period. Among 720 E. coli and 384 Klebsiella isolates from hospitalized patients, 300 (41.7%) and 198 (51.5%) were ESBLs producers, respectively. In out-patients samples, the rate of ESBLs production was 25% (90/360) and 40% (40/100) in E. coli and Klebsiella isolates, respectively. Prevalence of MBLs producing in hospital E. coli and Klebsiella isolates were 0.3% (2/720) and 2.6% (10/384), and for KPC data were 1.4% (10/720) and 48.4% (186/384), respectively. No MBLs and KPC producing isolate was seen in non-hospital E. coli and Klebsiella isolates except for one non-hospital KPC producing Klebsiella isolate.
ConclusionTh e result of our study showed high prevalence of ESBLs and KPC, but low prevalence of MBLs in cultured bacteria from urine samples of patients with acute UTI. In addition, KPC was the main carbapenem resistance mechanism in Klebsiella and E. coli isolates.
Keywords: Antibiotic resistance, carbapenem drugs, extended spectrum β-lactamase, Klebsiella pneumoniae carbapenemase, metallo-β-Lactamase, urinary tract infection -
مقدمههدف از این مطالعه، جداسازی و شناسایی سویه های انتروباکتریاسه ی تولید کننده ی آنزیم کارباپنماز KPC (مخفف کلبسیلا پنومونیه کارباپنماز یا klebsiella pneumoniae carbapenemase) و تعیین الگوی حساسیت آنتی بیوتیکی در آن ها در چند بیمارستان شهر اصفهان بود که به طور جامع بررسی نشده بود.روش هابه منظور بررسی وجود آنزیم کارباپنماز KPC از آزمون هاج تغییر یافته (MHT یا Modified Hodge test) و آزمون تاییدی آن توسط تعیین کمترین غلظت ممانعتی (MIC یا Minimum inhibitory concentration) به روش Etest (Epsilometer test) برای ایمی پنم استفاده شد و الگوی حساسیت آنتی بیوتیکی آن ها توسط روش دیسک دیفیوژن (کربی-بائر یا Kirby-Bauer) تعیین گردید.یافته هاتعداد 475 سویه انتروباکتریاسه از نمونه های بالینی مختلف در طی 9 ماه (تیر 1391 تا فروردین 1392) از سه بیمارستان شهر اصفهان جداسازی شدند که از این تعداد، 285 ایزوله (60 درصد) اشرشیاکلی، 128 ایزوله (27 رصد) کلبسیلا (75 عدد ک. پنومونیه)، 16 ایزوله (4/3 درصد) انتروباکتر ائروژنز، 12 ایزوله (5/2 درصد) پروتئوس ولگاریس، 9 ایزوله (9/1 درصد) انتروباکترکلواسه آ، 8 ایزوله (7/1 درصد) سیتروباکتر فروندی، 4 ایزوله (84/0 درصد) پروتئوس میرابیلیس، 4 ایزوله (84/0 درصد) شیگلا سونئی، 3 ایزوله (6/0 درصد) سیتروباکتر دایورسوس، 3 ایزوله (6/0 درصد) سراشیا مارسه سنس، 2 ایزوله (42/0 درصد) سالمونلا پاراتیفی A و یک ایزوله (2/0 درصد) هم پروویدانسیا استوارتی بودند. برای باکتری اشرشیاکلی مقاومت به دو دیسک سفتازیدیم و سفوتاکسیم و نیز میزان غیر حساس بودن (نیمه حساس یا مقاوم) برای دو دیسک ایمی پنم و مروپنم به ترتیب 60، 63، 6 و 9 درصد، برای باکتری کلبسیلا به ترتیب 70، 75، 55 و 58 درصد و در مورد گونه کلبسیلا پنومونیه به ترتیب 100، 100، 95 و 94 درصد و برای دیگر سویه ها به ترتیب 20، 17، 5 و 3 درصد بود. آزمون آنزیم کارباپنماز KPC برای 2 سویه (7/0 درصد) از سویه های اشرشیاکلی، 65 سویه (87 درصد) از سویه های کلبسیلا پنومونیه و یک سویه پروتئوس ولگاریس (6 درصد) از سویه های پروتئوس مثبت بود. همگی سویه هایی که آزمون هاج تغییر یافته ی آن ها در مرحله ی قبلی مثبت بود، MIC ایمی پنم آن ها نیز در محدوده ی مقاوم بود و بنابراین، مقاومت به کارباپنم در آن ها ثابت شد.
نتیجه گیریبه طور کلی، نتایج این تحقیق نشان داد که در بین گونه های شایع انتروباکتریاسه، باکتری کلبسیلا پنومونیه نسبت به سایر باکتری ها حاوی میزان بالاتری از آنزیم KPC بود و اغلب گونه های آن دارای مقاومت چند دارویی بالایی بودند.
کلید واژگان: انتروباکتریاسه, کلبسیلا پنومونیه, آنزیم کلبسیلا پنومونیه کارباپنماز (KPC), روش Etest, آزمون هاج تغییر یافته (MHT)BackgroundThe aim of this study was to isolate and identify KPC (Klebsiella pneumonia carbapenemase) enzyme producing strains of Enterobacteriaceae، and determine their antibiotic susceptibility pattern in three hospitals of Isfahan، Iran. This subject has not previously been investigated comprehensively.MethodsKPC detection was done by Modified Hodge Test (MHT) and their antibiotic susceptibility patterns were determined by disc diffusion method.FindingsThe total of 475 strains were isolated and detected as Enterobacteriaceae during the period of 9 months (July 2012-March 2013) in three hospitals in Isfahan province، Iran. These isolates contained Escherichia coli: 285 strains (60%)، Klebsiella: 128 strains (27%)، Enterobacter aerogenes: 16 strains (3. 4%)، Enterobacter cloacae: 9 strains (1. 9%)، Proteus vulgaris: 12 strains (2. 5%)، Proteus mirabilis: 4 strains (0. 84%)، Citrobacter freundii: 8 strains (1. 7%)، Citrobacter diversus: 3 strains (0. 6%)، Serratia marcescens: 3 strains (0. 6%)، Shigella sonnei: 4 strains (0. 84%)، Salmonella paratyphi A: 2 strains (0. 42%)، and Providencia stuartii: 1 strain (0. 2%). Percentage resistant to ceftazidime and cefotaxime and non-susceptibility to imipenem and meropenem for above isolates were، respectively، as follows: for Escherichia coli isolates 60، 63، 6، and 9; for Klebsiella isolates 70، 75، 55، and 58; for Klebsiella pneumoniae 100، 100، 95، and 94; and for other Enterobacteriaceae isolates 20، 17، 5، and 3. Our results showed that KPC test was positive for 2 isolates (0. 7%) among Escherichia coli strains، 65 (87%) isolates among Klebsiella pneumoniae، and 1 isolate (6%) among Proteus strains. This was approved by Etest based MIC method.ConclusionIn general، our results showed that among Enterobacteriaceae isolates، Klebsiella pneumoniae isolates had higher KPC enzyme production، and most strains had multidrug resistant.Keywords: Enterobacteriaceae, Klebsiella pneumoniae, Klebsiella pneumoniae carbapenemase (KPC), Etest method, Modified Hodge Test (MHT) -
مقدمهعلاوه بر مطرح بودن باکتریوسین ها به عنوان جایگزین آنتی بیوتیک های مرسوم، کاربرد رایج آن ها به عنوان ماده ی نگه دارنده و محافظ در صنایع غذایی است. هدف از این مطالعه، جدا سازی و خالص سازی باکتریوسین های مقاوم به اشعه ی ماورای بنفش (Ultraviolet یا UV) از سویه های انتروکوک بود که بر ضد باکتری لیستریا منوسیتوژنز فعال باشند.روش هاسویه های باکتری انتروکوک از نمونه های مختلف بالینی جدا سازی و شناسایی شدند و تولید باکتریوسین در آن ها علیه سویه های باکتری لیستریا منوسیتوژنز مورد بررسی قرار گرفت. یک ایزوله ی باکتری انتروکوک، که دارای تولید قابل ملاحظه ی باکتریوسین بر علیه همگی سویه های لیستریا منوسیتوژنز مورد مطالعه بود، به روش فنوتیپی و بیوشیمیایی و نیز روش ملکولی 16SrRNA مورد شناسایی قرار گرفت و در سایت NCBI (National Center for Biotechnology Information) ثبت گردید. در مرحله ی بعد، این باکتریوسین خالص سازی شد و اثرات آنزیم های مختلف پروتئولیتیک و نیز تیمارهای pH، حرارت و اشعه ی ماورای بنفش بر روی آن مورد بررسی قرار گرفت؛ وزن ملکولی آن نیز به روش SDS-PAGE مشخص گردید.یافته هااز 70 سویه ی مختلف انتروکوک جدا سازی شده، 5 ایزوله ی انتروکوک دارای اثر مهاری بر علیه سویه های لیستریا منوسیتوژنز بود که از این میان، یک ایزوله بر ضد هر چهار سویه ی لیستریا منوسیتوژنز مورد مطالعه، دارای اثر مهاری بود. بر اساس نتایج تعیین توالی 16SrRNA این ایزوله، مشخص شد که این باکتری، یک سویه از انتروکوک فاسیوم بود که به نام DSH20 و با شماره ی دسترسی JX567733.1در سایت NCBI به ثبت رسید. آنزیم های پروتئولیتیک استفاده شده باعث از بین رفتن فعالیت ضدمیکروبی باکتریوسین گردید که تاییدی بر پروتئینی بودن این ترکیب بود. باکتریوسین تولیدی به اثر درجه ی حرارت بالا، تغییرات pH و اشعه ی ماورای بنفش مقاوم بود. وزن ملکولی باکتریوسین جدا سازی شده به روش SDS-PAGE در حدود 35 کیلودالتون تخمین زده شد.نتیجه گیریخصوصیات بیوشیمیایی باکتریوسین مورد مطالعه از قبیل پایداری حرارتی، مقاومت به اشعه ی ماورای بنفش و pH بسیار قابل توجه بود. توانایی بالقوه ی این باکتریوسین، آن را به عنوان ترکیب ضد میکروبی جایگزین علیه لیستریا منوسیتوژنز و نیز نگه دارنده ی غذاهای تخمیری مطرح می سازد.
کلید واژگان: باکتریوسین, انتروکوک مقاوم به وانکومایسین, لیستریا منوسیتوژنز, بیماری لیستریوزBackgroundFurthermore application of bacteriocins as alternates for antibiotics، they are fermented as food preservation currently. The aim of this study was isolation and purification of ultraviolet-resistant bacteriocins from enterococci strains active against Listeria monocytogenes.MethodsDifferent strains of enterococci bacteria were isolated and identified from various clinical specimens and bacteriocin production were evaluated against strains of Listeria monocytogenes. An isolate of enterococcus bacteria that produce significant bacteriocin against all studied strains of Listeria monocytogenes was identified based on its phenotypical and biochemical properties as well as its 16SrRNA gene sequencing. In the next stage، this bacteriocin was purified and the effects of proteolytic enzymes، pH، temperature and ultraviolet radiation (UV) on its activity were tested and its molecular weight was determined by SDS-PAGE (Sodium dodecyl sulfate polyacrylamide gel electrophoresis) method.Findings17 strains of enterococci were isolated and five isolates exhibited an inhibitory effect against Listeria monocytogenes strains and among them، one enterococcus had inhibitory effect against all four strains of Listeria monocytogenes. This enterococcus was identified as Enterococcus faecium strain DSH20 (access number: JX567733. 1). Using proteolytic enzymes led to the loss of antimicrobial activity; so، protein nature of it was confirmed. Bacteriocin production was resistant to UV، high temperature and pH changes. The molecular weight of the bacteriocin was at approximately 35 kilodaltons.ConclusionBiochemical properties of this bacteriocin، such as thermal stability، resistance to UV radiation and pH، were significant. These properties present it as an alternative of antimicrobial agents against Listeria monocytogenes and preserving of fermented foods.Keywords: Bacteriocin, Vancomycin, resistant enterococcus, Listeria monocytogenes, Listeriosis -
مقدمهبیماران تحت همودیالیز در هر بار دیالیز در مجاورت حجم قابل توجهی از آب قرار می گیرند. در عین حال به علت این که آب دیالیز به طور مستقیم با خون بیمار در تماس می باشد. اگر رعایت گندزدایی منظم لوله ها انجام نشود، احتمال بروز عوارض ناشی از انتقال اندوتوکسین تولیدشده از باکتری ها در آب به بدن بیمار وجود خواهد داشت. بنابراین کنترل مرتب دستگاه دیالیز و تجهیزات ضد عفونی کننده ی آب دستگاه، امری لازم و ضروری می باشد. این مطالعه با هدف مقایسه ی فراوانی نسبی کشت مثبت میکروارگانیسم در آب شهر قبل و بعد از تصفیه، کشت آب بعد از عبور از لوله ها و کشت مایع دیالیز قبل از ورود به فیلتر (صافی) دیالیز در بخش همودیالیز بیمارستان الزهرا (س) اصفهان به انجام رسید.روش هادر یک مطالعه ی مداخله ای که در سال های 1389 و 1391 در بیمارستان الزهرا (س) اصفهان انجام شد، از آب شهر قبل و بعد از تصفیه، بعد از عبور از لوله ها و از محلول دیالیز قبل از فیلتر، یک نمونه گرفته شد و جهت کشت ارسال گردید. نمونه های گرفته شده در محیط TSA (Tryptic soy agar) کشت داده شد و سپس بررسی میکروبیولوژیک بر روی باکتری های جداشده انجام گردید. مداخله شامل ضد عفونی کردن لوله های انتقال آب و تعویض لوله های بخش همودیالیز بود.یافته هادر 8 نمونه (57 درصد) از 14 نمونه ی اخذ شده در زمان قبل از مداخله، باکتری رشد نمود که در 5 مورد E-coli و در 3 مورد پسودوموناس و در یک نمونه نیز قارچ کاندیدیا بود. ولی بعد از اقدامات مداخله ای(شامل تعویض و ضد عفونی لوله های آب) از 14 نمونه ی گرفته شده فقط در یک نمونه ی آب، بعد از تصفیه و قبل ورود به لوله های آب دیالیز، باکتری آلکالیژنز رشد نمود.نتیجه گیریبا توجه به نتایج این مطالعه، احتمال رشد باکتری در سیستم تصفیه آب دیالیز بسیار زیاد است و برای مقابله با آن نیاز به ضد عفونی مرتب و کشت و نمونه گیری میکروبی منظم است. بنابراین لازم است سیستم تصفیه ی آب طبق یک برنامه ی روتین به طور مرتب ضد عفونی و نمونه برداری میکروبی شود.
کلید واژگان: همودیالیز, محلول دیالیز, آلودگی میکروبیBackgroundPatients under hemodialysis are exposed to remarkable volume of water. As dialysis water is in direct contact with patients’ blood, absence of regular disinfection of pipes will facilitate the transfer of the endotoxins produced by bacteria in water to the patient's body. Thus, regular control of dialysis system and water disinfectant equipment is compulsory. This study aimed at comparing relative frequency of positive culture for microorganisms in piped water before and after filtration, culture of water after passing from pipes, and culture of dialysis fluid before entering the dialysis filter in hemodialysis section of Alzahra Medical Center (Isfahan, Iran).MethodsDuring 2010 and 2012, an interventional study was performed in Alzahra Hospital. Samples were taken from piped water before and after filtration and from dialysis fluid before passing from membrane. The obtained samples were cultured in tryptic soy agar (TSA) and the isolated bacteria were then evaluated. Interventions included the disinfection of pipes used for transmission of water and replacement of pipes in hemodialysis section.FindingsPurified water was studied before and after passing the pipes. Dialysis fluid was also assessed before and after the intervention. Bacteria had grown in eight out of 14 samples (57%) before the intervention. In fact, five samples developed Escherichia coli, three had pseudomonas, and one had candida. However, after the intervention, only one out of 14 samples was found to have bacteria (alcaligenes) after filtration and before entering dialysis water pipes.ConclusionAccording to the results of this study, the probability of bacterial growth is very high in filtration system of dialysis water. Regular disinfection and microbial sampling and culture are hence crucial.Keywords: Hemodialysis, Dialysis fluid, Microbial contamination -
زمینه و هدفکانکتور لوله تراشه از جمله وسایلی است که طبق پروتکل کشور ما باید به صورت یک بار مصرف استفاده شود ولی به دلیل محدودیتهای مالی در بسیاری از مراکز به صورت چند بار مصرف استفاده می شود. در این مطالعه که در سال 1388 در بیمارستان سعدی اصفهان انجام گردید، کلونیزاسیون کانکتورها و نیاز به تعویض آنها بر حسب مدت استفاده مورد بررسی قرار گرفت.روش بررسیدر این مطالعه از تعداد 150 کانکتور لوله تراشه که برای 24، 48 یا72 ساعت مورد استفاده قرار گرفته بودند، نمونه گیری و کشت میکروبی با روش های استاندارد انجام شد و باکتری های جدا شده شناسایی و شمارش گردیدند. درصد کلونیزاسیون در سه گروه مورد مقایسه قرار گرفت.یافته هامیزان کلونیزاسیون در 24 ساعت 2%، در 48 ساعت 18% و در 72 ساعت 30% بود. باکتری های جدا شده غالبا گونه های استرپتوکوکسی، باسیلوس، استافیلوکوکهای گرم منفی، کلبسیلا و قارچ بودند.
نتیجه گیریاستفاده از کانکتورهای لوله تراشه در مراکز به صورت چند بار مصرف شاید بتواند شانس ابتلا به عفونتهای بیمارستانی را با کلونیزاسیون باکتری های فرصت طلب در لوله ها و تشکیل بیو فیلم برای استفاده طولانی مدت بالا ببرد. با این وجود در مراکزی که از نظر مالی با مشکل مواجه می باشند استفاده حداکثر به مدت 24 ساعت می تواند قابل قبول باشد.
کلید واژگان: کلونیزاسیون, سیستم تنفسی, کانکتور لوله تراشهBackgroundColonization of bacteria on the equipments in touch with airway and respiratory mucosa may cause respiratory infections. According to available protocols، endotracheal tube connectors should be disposable، but because of financial issues many hospitals use it more than once. In the present study، the colonization rate of endotracheal tube connectors after 24، 48 and 72 hours of administration in multiple patients on mechanical ventilation in the operating room was assessed.MethodsIn this study، 150 endotracheal tube connectors after repeated use in different patients have been sampled and cultured using standard microbiological methods. Samples were categorized in three groups based on the duration of administration (24، 48 or 72 hours). Colony counts were identified and compared among the three groups.ResultsColonization rate after 24، 48 and 72 hours of usage was 2%، 18% and 30%، respectively (p<0. 05). Separated bacteria usually were in kinds of Streptococci، Bacillus SP، Coagulate negative staphylococci، Klebsiella SP and Mold.ConclusionUsing endotracheal tube connector for more than 24 hours significantly increases the colonization rate. In hospitals with limited financial resources، repeated use of endotracheal tube connector up to twenty four hours maybe acceptable.Keywords: colonization, ventilator, endotracheal tube connector, bacteria -
مقدمهکلستریدیوم دیفسیل عامل اسهال همراه با آنتی بیوتیک و کولیت با غشای کاذب می باشد. در این تحقیق فراوانی نسبی توکسین کلستریدیوم دیفسیل در مدفوع بیماران مبتلا به اسهال بستری در بیمارستان الزهرای (س) اصفهان به روش ELISA تعیین شد.روش هادر یک مطالعه ی توصیفی تحلیلی که در سال 1388 بر روی 162 بیمار بستری مبتلا به اسهال در بیمارستان الزهرای (س) اصفهان انجام گردید، نمونه ی مدفوع بیمارانی که در بیمارستان بستری بودند و به دنبال مصرف آنتی بیوتیک دچار اسهال شده بودند، جمع آوری شد و با انجام آزمایش ایمونواسی بر پایه ی واکنش آنزیمی (Enzyme-linked immunosorbent assay یا ELISA) وجود دو توکسین A و B مورد بررسی قرار گرفت. اطلاعات جمع آوری شده با نرم افزار SPSS و آزمون آماری 2χ مورد آنالیز قرار گرفت و 05/0 > P معنی دار در نظر گرفته شد.یافته هااز تعداد 162 بیمار مورد بررسی، 36 مورد (2/22 درصد) توکسین کلستریدیم دیفسیل فعال شده در مدفوع داشتند. نسبت مردان مبتلا به زنان بیشتر بود (005/0 > P). همچنین اطفال زیر 4 سال، درصد قابل ملاحظه ای از بیماران آلوده به کلستریدیوم دیفسیل را تشکیل می دادند.نتیجه گیریمصرف بی رویه ی آنتی بیوتیک های وسیع الطیف، تاثیر بسزایی در افزایش شیوع این ارگانیسم داشته است. بنابراین لزوم تشکیل کمیته ی مصرف آنتی بیوتیک در مراکز درمانی به منظور کاهش و بهینه سازی مصرف آنتی بیوتیک دراین مراکز مشهود است.
کلید واژگان: کلستریدیوم دیفسیل, اسهال همراه با آنتی بیوتیک, توکسین A و BBackgroundThe present study was conducted to evaluate the relative frequency of Clostridium difficile (C. difficile) in patients at a university hospital, Isfahan, Iran.MethodsThis descriptive, analytic study was conducted on 162 patients hospitalized in various wards of Alzahra Hospital (an 800-bed teaching hospital) of Isfahan during October 2009 to March 2010. Fecal samples of patients who suffered from diarrhea after receiving antibiotics were collected. Microbial analysis was performed to determine the existence of C. difficile. C. difficile toxins (A and B) were detected by ELISA method. The obtained data was statistically analyzed using chi-square test in SPSS at a significance level of P < 0.05.FindingsC. difficile toxins were detected in 36 (22.2%) patients. The frequency of toxins occurrence was significantly higher in men (P ≤ 0.005). In addition, a large number of individuals infected by C. difficile toxins were children under 4 years of age. Ceftriaxone caused many cases of diarrhea in our studied population.ConclusionIn general, based on our results, wrong prescription and antibiotics abuse can cause infection with C. difficile in patients receiving antibiotics. Therefore, the physicians must pay more attention to the recovery of patients with antibiotics. -
مقدمه
معتادین تزریقی از مهم ترین گروه های در معرض خطر هپاتیت C می باشند و اعتیاد تزریقی مسوول بیش از 60 درصد موارد بروز این بیماری در دنیا شناخته شده است. غربال گری هپاتیت C در کمپ های نگهداری معتادین تزریقی تحت درمان با متادون (MMT) ضمن کمک به بیماریابی می تواند جهت اتخاذ سیاست های درمانی و پیش گیری مورد استفاده قرار گیرد.
روش هابا هماهنگی انجام شده با مراکز نگهداری معتادین تزریقی تحت درمان با متادون، پرسش نامه های طرح برای 80 مرکز فعال ارسال و مقرر شد کسانی که پیشتر آزمایش هپاتیت C را انجام نداده اند، جهت انجام این آزمایش ارجاع و نتایج به معاونت درمان استان اصفهان منعکس گردد.
یافته هادر هفت مرکز نگهداری معتادین تزریقی تحت درمان با متادون پرسش نامه های خود تکمیل شده که از 1055 مددجو جمع آوری شده بود را به معاونت درمان ارسال نمودند. اکثر پرسش نامه های ارجاع شده جواب آزمایش هپاتیت C نداشتند. در کل، 74 مورد (0/7 درصد) مثبت هپاتیت C گزارش گردیده بود.
نتیجه گیرینتایج این مطالعه منعکس کننده ی اشکال در نحوه ی انجام طرح بود. دلایل آن را می توان عدم جلب مشارکت موثر مسوولین و پرسنل مراکز و مددجویان اعلام کرد. توجیه و حمایت مادی و معنوی پرسنل و مددجویان به محققین دیگری که قصد تکرار این تجربه را دارند، توصیه می گردد.
کلید واژگان: هپاتیت C, معتاد تزریقی, درمان با متادونBackgroundIntravenous drug users (IVDUs) are the most at risk group for viral hepatitis C and injection drug is responsible to more than 60% of HCV infected new cases worldwide. Hepatitis C screening in centers for methadone maintenance treatment (MMT) has several benefits in harm reduction stategies.
MethodsIn an action research study, after coordinating centers for MMT, questiononaires including demographic and risk factors of HCV were sent to 80 active centes in Isfahan province to complete and add their result for HCV-Ab test.
FindingOnly seven centers with 1055 members, sent their completed questionaires to administrators, but most of documents were without any HCV-Ab test results. Overall, 74 (7.0%) participants were positive for hepatitis C.
ConclusionThe results of this study indicated serious problem in execution which was due to lack of cooperration of the center's mannagers, stuffs and members. Hence, it is recommended to do active intervention and consider a reward for future investigators.
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سابقه و هدفاشریشیا کلی و کلبسیلا نمونیه شایع ترین عوامل ایجادعفونت های ادراری می باشند وشیوع بتا لاکتامازهای وسیع الطیف (ESBLs) در این باکتری ها منجر به گسترش مقاومت آنتی بیوتیکی و مرگ و میر بیماران می گردد، مهم ترین راه کنترل ESBLs در باکتری ها، مهار انتشار این سویه ها و استفاده از روش های استاندارد شناسایی ESBLs می باشد. هدف از این پژوهش مقایسه فراوانی بتالاکتامازهایوسیع الطیف در سویه های اشریشیاکلی و کلبسیلانمونیه در مبتلایان به عفونت های ادراری با تست های فنوتیپی می باشد.مواد و روش هااین مطالعه به صورت مقطعی-توصیفی و در سال های 89-1388 در بیمارستان های الزهرا و شریعتی در اصفهان انجام گرفت، برای این منظور بر اساس فرمول حجم نمونه، به طور تصادفی 91 نمونه از عفونت های ادراری بررسی گردید، شناسایی باکتری ها بر اساس روش های میکروبیولوژیک، شناسایی ESBLsبا تست های غربالگری و تاییدی و بررسی الگوی مقاومت آنتی بیوتیکی با روش کربی بائر انجام گردید.یافته هافراوانیESBLs در سویه های اشریشیا کلی و کلبسیلا نمونیه به ترتیب 97/47% و 66/41% بود. براساس نتایج آنتیبیوگرام: به ترتیب 2/59%، 9/54%، 3/30%، 8/27%، 5/19% و 7/16% از سویه های اشریشیا کلی در برابر کوتریموکسازول، نالیدیکسیک اسید، سیپروفلوکساسین، جنتامایسین، سفتازیدیم و نیتروفورانتوئین و به ترتیب 75%،50%،40%، 5/44%، 5/37%، 5/37%، 3/22% و 0% از سویه های کلبسیلا نمونیه دربرابرآمپی سیلین، کوتریموکسازول، نیتروفورانتوئین، سفتازیدیم، آمیکاسین، سفوتاکسیم، ایمی پنم و سیپروفلوکساسین مقاوم بودند.نتیجه گیرینتایج حاکی از شیوعبیشترESBLs، همچنین مقاومت آنتی بیوتیکی در باکتری های جداشده از بیماران بستری در مقایسه با بیمارانسرپایی بود که این امر بیان گر انتشار گسترده سویه های مقاوم در برابر آنتی بیوتیک در بیمارستان ها می باشد.
کلید واژگان: عفونت ادراری, بیماران بستری, بیماران سرپایی, باسیل های گرم منفی, بتالاکتامازهای وسیع الطیفIntroduction andObjectivesEscherichia coli and Klebsiella pneumoniae are the most agent of urinary tract infection (UTI) and prevalence Extended-Spectrum Beta-lactamase (ESBLs) in these bacteria due to spread of antibiotic resistance and mortality and morbidity in patients. The best manner for control of ESBLs in bacteria, are inhibition of spread these bacteria and use of standard method for recognizes ESBLs producer strains.Subject of this study was comparison frequency of ESBLs in Escherichia coli and Klebsiella pneumonia strain in UTI acquired patients with phenotypic test.Materials And MethodsThis cross-sectional search was performed in Azzahra and Shariaty hospitals during of 2008-2009 years in Esfahan, according to statistical formula randomly selected 91 samples from urinary infections. Bacterial identification was performed with microbiological methods, ESBLs production was performed with screening and confirmatory test and survey antibiotics resistant pattern was performed with Kirby method.ResultsFrequence of ESBLs in E.coli and K.pneumoniae strains was respectively 47.97% and 41.66%. According to antibiogram result respectively 59.2%, 54.9%, 30.3%, 27.8%, 19.5% and 16.7% of E.coli strains were resistant into Co-Trimoxazole, Nalidixic acid, Ciprofloxacin, Gentamicin, Ceftazidime and Nitrofurantoin and respectively 75%, 50%, 40%, 44.5%,37.5%, 37.5%, 22.3% and 0% of K.pneumoniae strains were resistant into Ampicillin, Co-Trimoxazole, Nitrofurantoin, Ceftazidime, Amikacin, Cephotaxime, Imipenem and Ciprofloxacin.ConclusionThe result showed high frequence of ESBLs, so antibiotic resistant in isolated bacteria from hospitalized into out patience's that represent high spread antibiotic resistant strains in hospitals. -
BackgroundThe rapid emergence of antibiotic resistance, especially broad-spectrum antibiotics, resulted in the avid use of new potent antibiotics. Ceftriaxone and ceftazidime, two third-generation cephalosporin, are usually used to manage complicated and uncomplicated infections. The use of cefepime in resistant infections is increasing gradually, which put this potent antibiotic at risk of resistance.Patients andMethodsDuring an 18-month period, a total of 220 gram-negative bacteria including Pseudomonas spp, Serratia spp, Acinetobacter spp, Proteus spp, E-coli and Klebsiella spp. have been isolated by standard microbiologicalmethods from nosocomial surgical site, abscess, blood stream and urinary tract infections. MIC of antibiotics on isolated bacteria was determined by gradient concentration method.ResultsTotally, 29.4%, 19.5% and 23.3% of isolated bacteria with MIC≤8μg/ml were sensitive to cefepime, ceftriaxone and ceftazidime, respectively. High level resistance with MIC≥256μg/ml to cefepime, ceftriaxone and ceftazidime was also observed in 47.1%, 70.8% and 62.5% of cases, respectively (p<0.05). High level resistance to cefepime were more commonly observed for pseudomonas (73.1%) and Klebsiella spp. (73.5%), respectively (p<0.05).ConclusionAccording to CLSI criteria, 47.1% of isolated bacteria in this study showed high level of resistance(MIC≥256μg/ml) to cefepime. Therefore application of cefepime, as a drug of choice, for gram-negative organisms is not reasonable. Our result demonstrated that this potent antibiotic should not be used as a choice for empiric antibiotic therapy, in the cases of nosocomial infections caused by gram-negative organisms.
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