فهرست مطالب sushila maan
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Viral and bacterial gastroenteritis and diarrhea have long been a problem in livestock with devastating effects on animal health and production causing a heavy financial burden on producers. Therefore, the bead-based multiplex detection assay was created for simultaneous detection of three livestock viral diarrheic agents viz. bovine rotavirus (BRV), bovine coronavirus (BCoV) and bluetongue virus (BTV). The primers and probes for triplex MAGPIX assay for simultaneous detection of three enteric viruses were designed and the assay was optimized for hybridization temperature, primer-probe and bead concentrations. The newly developed MAGPIX assay was used to determine the prevalence of these diarrhea-associated viruses by testing 200 fecal samples collected from Haryana state of India during 2018-2019. The limit of detection of the developed triplex assay was 1 × 105, 1 × 104, and 1 × 105 RNA copies for BRV, BCoV, and BTV, respectively, being lower than the reverse transcription-quantitative polymerase chain reaction (RT-qPCR). However, it was higher than the conventional RT-PCR, showing it to be more sensitive. The newly developed MAGPIX assay was a rapid, cost-effective and high throughput diagnostic tool for identification of three major entero-pathogenic diarrhea associated viruses, either alone or in tandem, with the aim to prevent and control viral diarrhea in animals.Keywords: Bluetongue virus, Bovine coronavirus, Enteric viruses, Luminex assay, Rotavirus}
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World Organization for Animal Health has listed bluetongue (BT) under notifiable diseases. The BT is an arboviral infectious disease of domestic and wild ruminants caused by the bluetongue virus (BTV). Southern states of India had remained the point of attention for BT since first presence in 1964 in Maharashtra. Recently, northern states of India have also been reported positive for BTV in small ruminants. The present study reported the dual infection of BTV serotypes, BTV-12 and -16 in sheep population from Sirsa district of Haryana in the year 2016. After detection and serotyping with Seg-2 specific real time polymerase chain reaction (PCR), the Seg-2 and Seg-6 of BTV were PCR amplified and sequenced. On phylogenetic analysis it was detected to be clustered in nucleotype G and nucleotype B specific for BTV-12 and BTV-16, respectively. This was the first report of BTV-16 from Haryana. The results signified the co-infection of two different serotypes in an animal from a single outbreak.
Keywords: Bluetongue virus, Dual Infection, Goat, Molecular diagnosis, real time RT-PCR} -
BACKGROUND
Escherichia coli (E.coli) is one of the most common and important causative bacterium of urinary tract infections (UTIs) in both dogs and humans.
OBJECTIVESThis study aimed to identify virulence genes and a phylogenetic group of E. coli isolated from the urine of dogs suffering from UTIs.
METHODSE. coli were isolated from urine of dogs suffering from UTIs and tested for the presence of the virulence genes using conventional polymerase chain reaction (PCR) and sequencing method. On day 60 after immunization, half of the fish in each treatment was challenged intraperitoneally and the re- maining half of fish in the oral receiving bacterin groups were challenged by bath method with 1 LD50 and 1 LC50 of a Y. ruckeri local virulent isolate respectively.
RESULTSOut of a total of 103 samples, 25 were found to be positive for E. coli, of these 20 (80.0%) were identified as aer, 14(56.0%) as pap, 12(48.0%) as sfa, 8(32.0%) as afa, 5(20.0%) as hly and 5(20.0%) as cnf1 genes. None of the isolates carried cnf2 genes.
CONCLUSIONSThe study demonstrated a high occurrence of virulence genes. The phylogenetic compar- isons of these gene sequences detected in uropathogenic E. coli isolated from dogs showed high similarity to those present in the urine of humans with urinary tract infection. Phylogenetic comparisons of the virulence genes revealed that hly, sfa , cnf1 and pap matched to group B2, afa to group A and aer to group B2 and D.
Keywords: Dog, Escherichia coli, polymerase chain reaction, Urinary Tract Infection, virulence genes}
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