جستجوی مقالات مرتبط با کلیدواژه "hla-g" در نشریات گروه "پزشکی"
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Journal of Research in Applied and Basic Medical Sciences, Volume:10 Issue: 4, Autumn 2024, PP 420 -426Background & Aims
Type 1 diabetes mellitus (T1DM) is an autoimmune condition characterized by the destruction of pancreatic β-cells. While environmental factors and autoantibodies play a role, genetic predisposition, particularly involving HLA class II alleles (DR and DQ), is significant. This study aimed to evaluate the frequency of DRB1 and DQB1 genotypes associated with T1D, with a focus on gender differences.
Materials & MethodsA total of 187 Sudanese subjects, aged 5 to 18 years, were enrolled, including 87 T1D cases and 100 non-diabetic controls. The study was conducted in diabetes hospitals in Khartoum State. HLA gene polymorphisms were assessed using the allele-specific refractory mutation system-polymerase chain reaction (ARMS-PCR) method.
ResultsGenotype frequencies for C/C, G/G, and G/C were 11.8%, 66.7%, and 21.6% in females, and 10.2%, 67.3%, and 22.4% in males, respectively. Statistical analysis showed no significant gender-related differences in genotype distributions (Chi-square,
p = 0.968).ConclusionThe study found no significant association between genotype distributions and gender in Sudanese children with T1D. This suggests that gender does not significantly influence the distribution of DRB1 and DQB1 genotypes related to T1D in the study population.
Keywords: DRB1, DQB1 Alleles, Gender Differences, Genetic Predisposition, HLA Genotypes, Type 1 Diabetes Mellitus (T1DM) -
سابقه و هدف
مقایسه تنوع ژنتیکی مولکول های HLA در اقوام مختلف ایران، می تواند در ارائه راه کار مناسب برای تامین اهداکنندگان سلول های بنیادی خونساز جهت بیماران ایرانی کمک کننده باشد. هدف، مطالعه مقایسه دو گروه آللی شایع در ایران شامل HLA-B*35 و HLA-B*51، دراقوام ایرانی بود.
مواد و روش هادر این مطالعه توصیفی، تعیین آلل هایHLA-B در وضوح پایین با روشPCR-SSP صورت پذیرفت. اطلاعات قومیتی و HLA از قومیت های عرب (370 n=)، گیلک (510 n=)، لر (465 n=) و کرد (719 n=) جمع آوری و تجزیه و تحلیل گردیده و ارتباط آلل و نژاد، بررسی و با آزمون آماری کای دو، رابطه معنادار بین فراوانی آلل ها ارزیابی شد.
یافته هافراوانی HLA-B*35 در اقوام لر، گیلک، عرب و کرد به ترتیب عبارت بود از: 22/20، 75/22، 35/11 و 61/19 و به همین ترتیب برای HLA-B*51 ، فراوانی عبارت بود از 28/18، 31/9، 32/9 و 52/17. فراوانی های به دست آمده در جمعیت کلی ایران در این مطالعه عبارت بود از 19% برای HLA-B*35 و 2/14% برای HLA-B*51 . داده ها برای دو گروه آللی ذکر شده در اقوام مورد مطالعه، تفاوت معنادار نشان دادند (05/0 <p).
نتیجه گیریهر چند HLA-B*35 و HLA-B*51 ، در جمعیت کلی و هم در قومیت های بررسی شده، بیشترین فراوانی را در جایگاه ژنی HLA-B به خود اختصاص دادند ولی اختلاف آن ها در قومیت ها معنادار بود. این مطالعه، نشان دهنده تنوع ژنتیکی بالای HLA-B در اقوام مورد مطالعه بوده و می تواند در ارائه راه کار برای جستجوی اهداکننده مناسب جهت بیماران از اقوام مختلف کمک کننده باشد.
کلید واژگان: قومیت, ایران, HLA-B51, HLA-B35Background and ObjectivesComparing the genetic diversity of HLA molecules among various ethnic groups in Iran can assist in providing suitable strategies for sourcing hematopoietic stem cell donors for Iranian patients. The objective was to compare two prevalent allelic groups in the overall population of Iran, specifically HLA-B*35 and HLA-B*51, across different Iranian ethnicities
Materials and MethodsIn this descriptive study, the determination of HLA-B alleles was conducted at low resolution level using the PCR-SSP method. Ethnic data and HLA information were collected and analyzed from the Arab ethnicity (n=370) as well as the Gilak (n=510), Lur (n=465), and Kurdish (n=719) ethnic groups. The relationship between alleles and ethnicity was examined, and a chi-square statistical method was employed to assess the significant relationship between the allele frequencies.
ResultsThe Frequencies of HLA-B*35 among the Lur, Gilak, Arab, and Kurdish populations were recorded as follows: 20.22%, 22.75%, 11.35%, and 19.61%, respectively. Similarly, the prevalence of HLA-B*51 was noted as 18.28%, 9.31%, 9.32%, and 17.52%. The overall frequencies observed in the general population of Iran in this study were 19% for HLA-B*35 and 14.2% for HLA-B*51. Furthermore, the frequencies for the two mentioned allelic groups in the studied ethnicities showed significant differences (P<0.05).
ConclusionsAlthough HLA-B*35 and HLA-B*51 exhibited the highest frequencies at the HLA-B gene locus in the overall population and the ethnic groups, the differences in the frequencies among the ethnicities were significant. This study highlights the high genetic diversity of HLA-B within the studied ethnic groups.
Keywords: Ethnicity, Iran, HLA-B51, HLA-B35 -
سابقه و هدف
انجام پیوند سلول های بنیادی خونساز در بیماران هماتولوژیک نیاز به سازگاری دهنده و گیرنده برای آنتی ژن های سازگاری نسجی یا HLA دارد. این مطالعه جهت بررسی فراوانی آلل های HLA و تنوع ژنتیکی آن ها در برخی اقوام ایرانی صورت گرفت تا در بانک HLA ذخیره شده و جهت جستجوی اهداکننده مناسب در پیوند مغز استخوان، مورد استفاده قرار گیرد.
مواد و روش هادر این مطالعه توصیفی، با استفاده از روش PCR-SSP، آلل های HLA-DRB1 مربوط به اهداکنندگان، در وضوح پایین تعیین گردید. با استفاده از داده های آزمایشگاهی HLA و نرم افزار مرکز سپاس مربوط به اطلاعات اهداکنندگان سلول های بنیادی خونساز سازمان انتقال خون، اطلاعات قومیتی و HLA از افراد دارای قومیت های گیلک، (510 n= ، 70/24 درصد)، لر (465 n= ، 53/22 درصد)، کرد (719 n= ، 84/34 درصد) و عرب (370 n=، 93/17 درصد) جمع آوری و تجزیه و تحلیل شد. با روش کای دو، رابطه معناداری بین فراوانی آلل ها در قومیت ها ارزیابی شد (05/0 <p).
یافته هادر گروه های آللی لکوس ژنی HLA-DRB1 ، HLA-DRB1*09 (6/0 درصد) و HLA-DRB1*12 (8/0 درصد) و HLA- DRB1*08(6/1 درصد) دارای فراوانی پایین بودند. گروه های آللی با فراوانی بالا عبارت بودند از HLA-DRB1*11 (7/22 درصد)، HLA-DRB1*03 (8/11 درصد)، HLA-DRB1*15 (7/11 درصد) و HLA- DRB1*04 (1/11 درصد). از بین این گروه های آللی، فراوانی 9 گروه آللی HLA-DRB1 ، در اقوام مورد مطالعه، تفاوت معنادار نشان دادند.
نتیجه گیریفراوانی تعدادی از آلل ها در بین اقوام ایرانی تفاوت معنادار داشتند. شناسایی شباهت ها و تفاوت ها در فراوانی آلل های HLA بین اقوام ایرانی می تواند علاوه بر گسترش بانک اهداکنندگان، در راستای برنامه ریزی تامین اهداکنندگان سلول های بنیادی خونساز برای بیماران از اقوام مختلف ایرانی کمک کننده باشد.
کلید واژگان: HLA-DRB1, قومیت, ایرانBackground and ObjectivesThis study looked at the frequency of HLA alleles and their genetic diversity in specific Iranian ethnic groups. This is important for the successful transplantation of hematopoietic stem cells.
Materials and MethodsIn this descriptive study, HLA-DRB1 alleles were determined in low resolution level for donors using the PCR-SSP method. By using the HLA lab data and the stem cell donors’ information in Iranian Blood Transfusion Organization, the ethnic and HLA information from the Gilak (n = 510, 24.70%), Lur (n = 465, 22.53%), Kurd (n = 719, 34.84%), and Arab (n = 370, 17.93%) ethnicities were collected and analyzed. The relationship between alleles and ethnicity was examined, and a statistically significant relationship (p < 0.05) between the frequency of alleles in the studied ethnic groups was evaluated using the chi-square test.
ResultsThe low frequency allelic groups related to HLA-DRB1 were HLA-DRB1*09 (0.6%), HLA-DRB1*12 (0.8%), and HLA-DRB1*08 (1.6%). Allelic groups with higher frequency included HLA-DRB1*11 (22.7%), HLA-DRB1*03 (11.8%), HLA-DRB1*15 (11.7%), and HLA-DRB1*04 (11.1%). Among the allelic groups of HLA-DRB1, the frequency of 9 HLA-DRB1 allelic groups showed significant differences in the studied populations.
Conclusions :
The frequency of several allelic groups showed significant differences among Iranian ethnicities. Identifying similarities and differences in the frequency of HLA alleles among Iranian ethnicities can help not only expand the pool of donors in registries but also assist in planning for providing of hematopoietic stem cell donors for patients from different Iranian ethnic groups.
Keywords: HLA-DRB1, Ethnicity, Iran -
سابقه و هدف
بیماران بتاتالاسمی نیازمند تزریق خون منظم هستند. واکنش تب زای غیرهمولیتیک یا FNHTR شایع ترین واکنش ناشی از تزریق خون می باشد. یکی از دلایل بروز FNHTR ، آنتی بادی ضد آنتی ژن های لکوسیتی کلاس دو است. پلی مورفیسم های HLA در جوامع مختلف متفاوت بوده و می تواند در بروز و یا مقاومت به FNHTR نقش داشته باشد. در مطالعه حاضر، به بررسی ارتباط پلی مورفیسم در آلل های HLA-DR با بروز FNHTR در بیماران بتاتالاسمی با تزریق خون مکرر استان تهران پرداختیم.
مواد و روش هادر مطالعه مقطعی- تحلیلی حاضر، 88 بیمار بتا تالاسمی ماژور و اینترمدیا با میانگین سنی 28/11 ± 63/38 سال و نسبت 35 مرد (8/39%) و 53 زن (2/60%) وارد مطالعه شده و جهت نتیجه بهتر، 70 بیمار تالاسمی با بروز FNHTR با 18 بیمار تالاسمی که بروز FNHTR نداشتند، مقایسه شدند. ژنوتیپ HLA-DR بیماران با روش PCR-SSP بررسی شد. مقایسه ها با آزمون کای دو و پیرسون انجام شد.
یافته هابررسی آلل های HLA-DRB1 نشان داد که آلل HLA-DRB1*11 بیشترین شیوع (7/26%) را دارد. ارتباط آماری معناداری بین آلل های HLA-DR با بروز FNHTR مشاهده نشد. اگر چه ممکن است HLA-DRB1*10 به عنوان یک مارکر ژنتیکی احتمالی در محافظت از بروز FNHTR نقش داشته باشد (049/0 =p).
نتیجه گیریدر این مطالعه، ارتباطی بین فراوانی آلل های HLA-DR با بروز واکنش FNHTR در بیماران بتاتالاسمی با تزریق خون مکرر مشاهده نشد، درخصوص HLA-DRB1*10 این ارتباط معنادار بوده و می تواند آلل محافظت کننده باشد. بررسی سطح آللی HLA کلاس II در جمعیت های بزرگ تر می تواند داده های عمیق تری را در مورد این ارتباط نشان دهند.
کلید واژگان: واکنش تب زای غیر همولیتیک, تزریق خون, پلی مورفیسم (ژنتیک), HLA-DR, تالاسمیBackground and Objectivesβ-thalassemia patients need regular blood. Regular blood transfusion has side effects. The most common of which is FNHTR. One of the causes of FNHTR is the antibody production against HLA-II antigens. HLA polymorphism vary in different communities and may affect the susceptibility or resistance to FNHTR. In this study, the relationship between HLA-DR polymorphisms and development of FNHTR in multi-transfused thalassemia patients in Tehran province was investigated.
Materials and MethodsIn this cross-sectional study, 88 ß-thalassemia major and intermediate patients with average age 38.63 ± 11.28 with 35 being male (39.8%) and 53 female (60.2%) were enrolled and for better results, 70 thalassemia patients with FNHTR were compared with 18 thalassemia patients without FNHTR. HLA-DR genotype was investigated by PCR-SSP method. Data were analyzed by chi-squared and pearson test.
ResultsThe results of PCR-SSP showed that HLA-DRB1*11 allele had the highest prevalence (26.7%) in the total study population. No statistically significant correlation between HLA-DR alleles and development of FNHTR was observed. Although HLA-DRB1*10 as a possible genetic marker may play a role in protecting against FNHTR (p = 0.049).
Conclusions :
In this study, no significant association between HLA-DR allele frequency and FNHTR was found. Although alleles HLA-DRB1*03, HLA-DRB1*10, HLA-DRB1*13 and HLA-DRB1*16 have higher prevalence in the no FNHTR group, but only in the case of HLA-DRB1*10 this relationship was significant and was considered as possible genetic markers against development of FNHTR. Further studies investigating HLA-II allelic levels in larger populations may provide more deep data on this association.
Keywords: Febrile Non-Hemolytic Transfusion Reaction, Blood Transfusion, Polymorphism (Genetics), HLA-DR, Thalassemia -
Gastroenterology and Hepatology From Bed to Bench Journal, Volume:16 Issue: 2, Spring 2023, PP 230 -233
The celiac disease (CD) diagnosis sometimes is challenging and diagnostic process cannot always follow a simple algorithm but it requires a close collaboration between histo-pathologists, clinicians, laboratory and genetic experts. The genetic predisposition for CD is related to HLA-DQ2 and/or DQ8 but other HLA haplotypes and non-HLA genes may be involved in genetic predisposition. In particular DQ7 may represent an additive and independent CD risk associated haplotype. We describe an unusual case of a female 42 year old with a previous diagnosis of Hodgkin lymphoma, who has a clinical presentation suggestive for CD with negativity for antitransglutaminase and anti-endomysium antibodies and HLA-DQ7 positivity
Keywords: Celiac disease, HLA-DQ7, Gluten free diet -
BackgroundRetinopathy of diabetes is a chronic diabetes mellitus complication affecting retinal vessels, and some ocular complications’ molecular mechanisms remain obscure.ObjectiveTo evaluate the expression of HLA-G1, HLA-G5, miRNA-181a, and miRNA-34a in the lens epithelial cells of patients with retinopathy of diabetes.MethodsIn a case-control study, 30 diabetic patients with retinopathy, 30 diabetic patients without retinopathy, and 30 cataract patients without diabetes mellitus as the control group were enrolled after a full description with details about the study methods and objectives. The expression of HLA G1, HLA G5, miRNA-181a, and miRNA-34a in lens epithelial cells was assessed by quantitative RT PCR. Moreover, the levels of HLA-G protein in aqueous humor were evaluated by the ELISA method.ResultsHLA-G1 expression was significantly upregulated in the retinopathy group (P=0.003). The aqueous humor of diabetic retinopathy patients contained significantly higher levels of HLA-G protein compared with the non-diabetic patients (P=0.001). miRNA-181a was significantly downregulated in the diabetic retinopathy group compared with the patients without diabetes (P=0.001). In addition, miRNA-34a was upregulated in the retinopathy group (P=0.009).ConclusionTaken together, the present results showed that HLA-G1 and miRNA-34a can be valuable markers for diabetic retinopathy. Our data offers new perspectives for improving the control of inflammation in the lens epithelial cells by considering HLA-G and miRNA.Keywords: Diabetic Retinopathy, HLA-G, Lens Epithelial Cells, miRNA-181a, miRNA34a
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Background and Aims
Human leukocyte antigen (HLA) molecules play a substantial role in T Lymphocyte-mediated adaptive immune response. Down-regulation of HLA expression may help the tumor to escape from immune surveillance. This study aimed to evaluate the correlation between HLA-G and HLA-E tissue distribution and the degree of tumor malignancy in human breast tumors.
Materials and MethodsThis cross-sectional study was conducted
on tissue samples of 145 patients with breast cancer. The distribution of HLA-G and HLA-E expressions were measured by the immunohistochemistry method.ResultsAmong 145 patients, 51% of tumors did not express HLA-E, and +1 positive was seen in 36.6 % of patients. +2 positive in 8.3% and +3 positive in 4.1% of patients. Moreover, 79.3% of tumors did not express HLA-G, 17.9% expressed +1 positive, 2.8% expressed +2 positive, and no patients expressed +3 positive. Generally, 20.7% and 49% of patients showed expression of HLA-G and HLA-E, respectively. A significant correlation was seen between the grade of disease and expression of HLA-E (p = 0.03) and HLA-G (p = 0.001). Moreover, a significant correlation was seen between the simultaneous expression of HLA-G and HLA-E with grade (p = 0.03, r = 0.176).
ConclusionSignificant correlation was seen between the distribution of HLA-G and HLA-E expression with a degree of malignancy. Therefore, these biomarkers’ expression may contribute to the prognosis and progression of breast cancer.
Keywords: Breast cancer, Tumor malignancy, HLA-E, HLA-G -
Introduction
Since HLA-B*15:02 is a biomarker for carbamazepine-induced Stevens-Johnson syndrome (SJS) and toxic epidermal necrolysis (TEN) in certain Asian populations, the United States food and drug administration (USFDA) recommends HLA-B*15:02 screening before carbamazepine administration in Asian and other communities. Several published reports across the globe suggested a strong association of HLA-B*15 with carbamazepine-induced hypersensitivity reactions.
MethodsThis study was conducted to estimate the prevalence and the genetic polymorphism of HLA-B*15 in the North Indian population (N=5469) by PCR sequence-specific oligonucleotide probe (SSOP) genotyping of the HLA-B locus.
ResultsThe total allelic variants of HLA-B*15 identified amongst the studied samples were 17. The most frequent among these was HLA-B*15:17 (2.030%). Subsequently, HLA -B* 15:01 (1.463%) and B*15:02 (1.225%) were more frequent. Further, 185 HLA-B*15 genotypes were seen among the studied population with which the most frequent were HLA-B*15:17-40:06(0.402%), HLA-B*15:17-35:03 (0.366%) and HLA-B*15:02-40:06 (0.347%).
ConclusionThis information highlights the prevalence and diversity of HLA-B*15 genotyping and its importance in the screening of carbamazepine-induced SJS/TEN in the North Indian population where the prevalence of HLA-B*15 allelic variants was on the higher side. Further, this baseline information could be further explored in the understanding of the pathogenesis of the disease and may contribute valuable information for designing effective vaccines and clinical trials.
Keywords: HLA-B, HLA-B*15 allele, HLA-B*15 gene polymorphism, Carbamazepine-induced hypersensitivity reactions -
BackgroundCeliac disease is the permanent intolerance to dietary gluten, the major protein component of wheat. The role of human leukocyte antigen (HLA) DQ2 heterodimer (DQA1*0501-DQB1*0201) in presenting gluten peptides to effectors T cells in celiac disease (CD) has been well documented. Epidemiological studies of the disease in Iran are not available. This study was aimed to investigate the frequency of HLADQ2 and HLADQ8 in children with celiac disease in Mashhad city.MethodsThis case-control study was conducted on 25 celiac patients and 25 matched healthy controls for HLA typing of DQ2/DQ8. CD diagnosis was reached in 25 subjects, according to the revised criteria of the European Society for Pediatric Gastroenterology Hepatology and Nutrition (ESPGHAN) and North American Society for Pediatric Gastroenterology, Hepatology and Nutrition criteria (NASPGHAN). Sensitivity, specificity, and negative and positive predictive values were calculated.ResultsMean age was 134.06±30.48 months in case and control groups, with no statistical difference between the two groups. 48% of cases and controls were male, and 52 % were female. HLA-DQ2/8 was positive with 80% (CI 95%:64-95), sensitivity was 80% (CI 95%:58-92), specificity 48% (CI 95%:28-68), NPV 70.58% (CI 95%:44-88), PPV 61(CI 95%:42.2-76.5) and accuracy was 64%.ConclusionA positive association was found between HLA DQ2/8 and Iranian celiac disease. As negative and predictive values were high, HLA typing may be considered a beneficial test for diagnosis confirmation.Keywords: Celiac disease, HLA-DQ2, 8, Gluten, Wheat
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Background and Aims
Psoriasis is a chronic inflammation of the skin caused by the proliferation of inappropriately differentiated horn cells, resulting in plaque psoriasis formation. It is not often fatal, and it may lead to physical disabilities and severe mental stress in which professional and social activities could be highly affected. It is generally accepted that the human leukocyte antigen (HLA)-CW06 allele has a significant role in the onset of this disease.
Materials and MethodsThis study determines the association between the HLA-CW06 allele and psoriasis. The present case-control study was conducted to evaluate the relation between HLA-CW06 and psoriasis in a population in Iran. This study was performed on 30 samples of patients with psoriasis.
ResultsThe results of polymerase chain reaction- sequence-specific primers for the detection of HLA-CW06 showed positive amplification in 7 out of 30 psoriasis patients as compared to 4 among 30 controls.
ConclusionThis study showed that due to different allele frequencies associated with psoriasis in different parts of the world, it seems that other genetic and epigenetic factors may be involved in this disease.
Keywords: HLA-CW06, Inflammatory disease, MHC, PCR-SSP, Psoriasis -
سابقه و هدف
ویروس HTLV-1 از جمله ویروس های منتقله از راه خون میباشد که در برخی مناطق جهان و در مناطقی از شمال شرق ایران به صورت اندمیک مشاهده میشود. مولکول HLA-G که به عنوان یک آنتیژن لکوسیتی غیرکلاسیک شناخته میشود، دارای پلیمورفیسم rs371194629 در ناحیه 3’-UTR خود میباشد که ناشی از یک توالی اضافه 14 نوکلیوتیدی است و در مطالعه های مختلف تاثیر آن بر ابتلا به عفونتهای مختلف نشان داده شده است. هدف از این پژوهش، بررسی تاثیر این پلیمورفیسم بر استعداد ابتلا به ویروس HTLV-1 در اهداکنندگان خون خراسان رضوی بود.
مواد و روش هادر این مطالعه تحلیلی، 131 اهداکننده خون مبتلا به ویروس HTLV-1 و 131 اهداکننده سالم شرکت داشتند. پس از استخراج DNA از لنفوسیت های خون محیطی، ژنوتیپ پلیمورفیسم rs371194629 با روش PCR-SSP تعیین شد. یافته های آماری به کمک آزمون کای دو و نرمافزار 23 SPSS تجزیه و تحلیل گردید.
یافته هاژنوتیپ هتروزیگوت DI ، بیشترین فراوانی را در هر دو گروه بیمار و شاهد داشت. نتایج به دست آمده نشان دهنده اختلاف معناداری بین فراوانی ژنوتیپ DD و استعداد ابتلا به ویروس HTLV-1 بود(03/0 p= ، 11/3-14/1 CI= 95% ، 89/1 OR=). بین فراوانی آللهای D و I و بیماری ارتباطی یافت نشد.
نتیجه گیریبا توجه به نتایج به دست آمده و نیز نتایج دیگران، پلیمورفیسم rs371194629در ناحیه 3’-UTR مولکول HLA-G میتواند یکی از عوامل موثر در ابتلا به ویروسHTLV-1 باشد.
کلید واژگان: HTLV-1, عفونت, HLA-GBackground and ObjectivesThe HLA-G antigen is a non-classical HLA class-I with limited polymorphism. Several studies have indicated the role of a 14 bp Indel polymorphism rs371194629 in the 3'-UTR region of the HLA-G in acquisition of HTLV-1 infection. In this study, we investigated the correlation between the genotypes of this polymorphism and HTLV-1 infection in blood donors of Khorasan Razavi province.
Materials and MethodsIn this analytical study, a total of 131 healthy individuals and 131 HTLV-1 positive patients were analyzed. After DNA extraction, the genotypes of the polymorphism were determined by PCR-SSP method. Statistical analysis was performed with chi-squared test using SPSS version 23 software.
ResultsThe DI was the most frequent genotype in both groups (49.6% of controls and 40.3% of patients). The DD genotype was associated with increased risk of HTLV-1 infection (OR=1.89, 95% CI=1.14-3.11, p=0.03). There was no significant difference between the frequency of D and I alleles in both groups.
ConclusionsOur findings confirm previous results about the significance of HLA-G polymorphisms in susceptibility to infectious diseases including HTLV-1. Further investigations could reveal the underlying mechanisms.
Keywords: HTLV-1, Infection, HLA-G -
Objective
Multiple sclerosis is a partially heritable autoimmune disease. HLA-DR2 is the largest identified genetic risk factor for MS. The largest identified genetic risk factor is haplotype from the MHC class II HLA-DR2 which increases risk of disease. The HLA-DR2 distribution in MS patients has been confirmed but contradictory outcomes have been found although its effect on ethnicity and gender is unclear. Since, there are no data regard to the association of HLA-DR2 (HLA-DRB1*1501-DRB5*01-DQB1*0602) with MS in Khuzestan, and because of ethnic diversity, investigating the association of HLA-DR2 with MS disability in both sex and ethnicity, was the aim of this study.
Materials & MethodsA total of 399 individuals were recruited in the study. HLA typing was conducted using the polymerase chain reaction amplification with sequence-specific primers (PCR-SSP) technology. Moreover, HLA-DR2 association with MS was analyzed. Also, probable association with gender, ethnicity, EDSS, MS clinical course was examined by chi square test.
ResultsHLA-DRB5*01--DQB1*0602- as the most common HLA haplotype was found in both patient and control groups. In contrast, DRB5*01+-DRB1*1501+-DQB1*0602- frequency was very low. It was observed that no haplotype has association with MS susceptibility. Interestingly, none of the haplotypes showed association with ethnicity, sex, EDSS and MS course except for HLA-DRB5*01+-DRB1*1501+-DQB1*0602- haplotype that was positively associated with EDSS steps 5 to 10 (p=0.014) and non-RRMS (p = 0.023).
ConclusionThere was no association between HLA-DR2 and MS susceptibility. However, the higher HLA-DRB5*01+-DRB1*1501+-DQB1*0602- frequency may play a role in MS development. Also, HLA-DR2 did not increase significantly concerning clinical course, ethnicity, sex, and EDSS. This study further supports the importance of replication studies as susceptible loci that might differ in various ethnicities. Therefore, it is concluded that the association between HLA-DR2 and MS is more allelic than haplotypic in Khuzestan
Keywords: Multiple sclerosis, HLA-DRB1*1501, HLA-DR2, PCR-SSP, Iran -
Given the potential link between genetic risk factors and clinical features of systemic lupus erythematosus (SLE), this study aimed to explore the relationship between human leukocyte antigen (HLA)-DRB1/DQB1 alleles and haplotypes and clinical sub-phenotypes of the disease in a group of Iranian SLE patients. HLA-DRB1 and HLA-DQB1 alleles were determined by PCR-SSP in 127 SLE patients and 153 ethnically-matched healthy controls. The relationships between various clinical manifestations and HLA alleles/haplotypes were analyzed in the patients. We observed the positive associations of DRB1*07 and DRB1*07-DQB1*02 haplotypes with articular and pulmonary involvement (p=0.006 and p<0.001 respectively), DRB1*03 andDQB1*02 alleles, and DRB1*03-DQB1*02 haplotypes with cutaneous (p=0.03, p=0.004 and p=0.02 respectively) and renal involvement, and DRB1*13 as well as DRB1*13-DQB1*06haplotypes with renal involvement. Conversely, negative associations of DRB1*13 with cutaneous and gastrointestinal disorders (p=0.004 and p=0.02 respectively) and DRB1*01 with renal involvement (p=0.03) were found in our patients. Patients carrying susceptible HLA-DRB1alleles had a higher risk for expression of cutaneous involvement (p=0.03), anti-coagulant antibody development (p=0.01), and a lower risk for pulmonary disorders compared to patients' negatives for susceptible alleles (p=0.04). Our findings on associations between HLA risk allele (DRB1*03) as well as non-risk alleles with particular clinical manifestations and between the potentially protective allele (DRB1*01) and protection against renal involvement indicate the important role of HLAclass II genes in predisposing of specific serological and clinical features of SLE disease which could be implicative for therapeutic applications and better management of SLE patients.
Keywords: HLA-DRB1 chains, HLA-DQB1, Systemic lupus erythematosus -
Gastroenterology and Hepatology From Bed to Bench Journal, Volume:14 Issue: 1, Winter 2021, PP 36 -43Aim
We evaluated the frequency of human leukocyte antigen (HLA) DQ2/DQ8 haplotypes as well as celiac disease (CD) among the first-degree relatives (FDRs) of CD patients, compared with healthy controls, and compared the HLA typing with serologic tests in this population.
BackgroundUntil now, no study has examined the frequency of HLA-DQ2/DQ8 haplotypes among the FDRs of Iranian patients with CD.
MethodsIn the current case-control study, 100 FDRs of CD patients and 151 healthy controls were included. Demographic characteristics were assessed using a research-made questionnaire. A blood sample was collected from each participant for HLA-DQ typing and measuring serum levels of anti-gliadin and anti-transglutaminase (anti-tTG) antibodies.
ResultsThe mean age of the FDRs of CD patients and controls was 30 and 35 years, respectively. Also, 51% (n=51) of the FDRs and 51.7% (n=78) of controls were female. CD was diagnosed among 3% (n=3) of the FDRs of CD patients. No significant difference was found in terms of the frequency of HLA-DQ alleles between the FDRs of CD patients and controls. Out of 100 FDRs of CD patients, 40% had HLA-DQ2 allele, 16% carried HLA-DQ8 allele, and 4% had both alleles. Surprisingly, the CD was diagnosed in three subjects among 60 FDRs of CD patients with HLA-DQ2 allele (3% of the whole population). This diagnosis was based on the results of serological tests as well as endoscopy and intestinal biopsy.
ConclusionCD was confirmed among 3% (n=3) of the FDRs of CD patients. We found that HLA typing is not effective in predicting CD among FDRs of CD patients. Other methods such as serological tests have a higher priority compared with HLA-DQ typing.
Keywords: Celiac disease, HLA-DQ2, HLA-DQ8, HLA typing, Iran -
Gastroenterology and Hepatology From Bed to Bench Journal, Volume:14 Issue: 1, Winter 2021, PP 31 -35Aim
We evaluated the frequency of human leukocyte antigen (HLA) DQ2/DQ8 haplotypes as well as celiac disease (CD) among the first-degree relatives (FDRs) of CD patients, compared with healthy controls, and compared the HLA typing with serologic tests in this population.
BackgroundUntil now, no study has examined the frequency of HLA-DQ2/DQ8 haplotypes among the FDRs of Iranian patients with CD.
MethodsIn the current case-control study, 100 FDRs of CD patients and 151 healthy controls were included. Demographic characteristics were assessed using a research-made questionnaire. A blood sample was collected from each participant for HLA-DQ typing and measuring serum levels of anti-gliadin and anti-transglutaminase (anti-tTG) antibodies.
ResultsThe mean age of the FDRs of CD patients and controls was 30 and 35 years, respectively. Also, 51% (n=51) of the FDRs and 51.7% (n=78) of controls were female. CD was diagnosed among 3% (n=3) of the FDRs of CD patients. No significant difference was found in terms of the frequency of HLA-DQ alleles between the FDRs of CD patients and controls. Out of 100 FDRs of CD patients, 40% had HLA-DQ2 allele, 16% carried HLA-DQ8 allele, and 4% had both alleles. Surprisingly, the CD was diagnosed in three subjects among 60 FDRs of CD patients with HLA-DQ2 allele (3% of the whole population). This diagnosis was based on the results of serological tests as well as endoscopy and intestinal biopsy.
ConclusionCD was confirmed among 3% (n=3) of the FDRs of CD patients. We found that HLA typing is not effective in predicting CD among FDRs of CD patients. Other methods such as serological tests have a higher priority compared with HLA-DQ typing
Keywords: Celiac disease, HLA-DQ2, HLA-DQ8, HLA typing, Iran -
مقدمه
از جمله دلایل احتمالی برای سقط های مکرر با علت نامشخص، وجود پلی مورفیسم های ژنی می باشد. مطالعه حاضر با هدف بررسی فراوانی و همراهی پلی مورفیسم های rs1233334 و rs2249863 بالادست ژن HLA-G با سقط مکرر خودبه خودی در جمعیت زنان شمال غرب ایران انجام شد.
روش کاراین مطالعه مورد- شاهدی در سال های 98-1397 بر روی 160 نفر از زنان مراجعه کننده از منطقه شمال غرب ایران به مرکز ناباروری مادر واقع در شهر تبریز انجام گرفت. 80 نفر از آنها با سابقه سقط مکرر خودبه خودی (حداقل 2 سقط) به عنوان گروه آزمایش و 80 نفر دیگر دارای حداقل یک فرزند و بدون سابقه سقط به عنوان گروه کنترل بودند. پس از تهیه نمونه خون محیطی از آنها، DNA ژنومی استخراج و پلی مورفیسم های مذکور به کمک PCR و تکنیک Sequencing بررسی شدند. تجزیه و تحلیل داده ها با استفاده از نرم افزار آماری SPSS (نسخه 22) و آزمون فیشر انجام شد. میزان p کمتر از 05/0 معنادار در نظر گرفته شد.
یافته هافراوانی های آلل G و ژنوتیپ GG جایگاه پلی مورفیسم rs2249863 بین دو گروه بیمار و کنترل تفاوت آماری معنی داری نشان داد (05/0<p). در مورد جایگاه پلی مورفیسم rs1233334، فراوانی های آلل C و ژنوتیپ CC هرچند بین دو گروه بیمار و کنترل متفاوت بودند، اما این تفاوت ها از نظر آماری معنی دار نبودند (05/0>p). همچنین بررسی هاپلوتایپی دو جایگاه، شایع ترین هاپلوتایپ را هاپلوتایپ CG مشخص کرد که فراوانی آن بین گروه های بیمار و کنترل از نظر آماری معنی دار بود (05/0<p).
نتیجه گیریپلی مورفیسم rs2249863 و هاپلوتایپ CG جایگاه های rs2249863 و rs1233334با اختلال سقط مکرر خودبه خودی در جمعیت مورد مطالعه همراهی نشان می دهند و می توان آنها را به عنوان فاکتور خطر بالقوه در نظر گرفت.
کلید واژگان: پلی مورفیسم rs2249863 و rs1233334, سقط مکرر خودبه خودی, HLA-GIntroductionGenetic polymorphisms are one of the possible causes of recurrent abortion with unknown cause. This study was performed with aim to investigate the association and frequency of rs2249863 and rs1233334 polymorphisms of the upstream region of HLA-G gene with the recurrent spontaneous abortion in women from Northwest of Iran.
MethodsThis case-control study was performed on 160 women from Northwest of Iran referring to the Madar infertility clinic of Tabriz between 2018 and 2019. Among them, 80 women with a history of recurrent spontaneous abortion (at least 2 abortions) were considered as case group and 80 women with at least one child and without any history of miscarriage as control group. After collecting blood samples, genome DNA was extracted and the polymorphisms were evaluated by PCR and sequencing technique. Data were analyzed using SPSS software (version 22) and Fisher test. P <0.05 was considered statistically significant.
ResultsThe frequencies of allele G and genotype GG in the rs2249863 polymorphism were significantly different between the case and control groups (P<0.05). In the rs1233334 polymorphism, although the frequencies of allele C and genotype CC were different between the case and control groups, but the differences were not statistically significant (P>0.05). Moreover, haplotype analysis identified the CG as the commonest haplotype that its frequency was significantly different between the case and control groups (P<0.05).
ConclusionThe rs2249863 polymorphism and CG haplotype of the rs2249863 and rs1233334 polymorphisms are associated with the recurrent spontaneous abortion in the studied population and they could be considered as potential risk factors for the disease.
Keywords: HLA-G, Polymorphism, Recurrent spontaneous abortion, rs1233334, rs2249863 -
Background
Delayed graft function (DGF) and acute rejection (AR) are common complications in kidney transplant patients.
ObjectivesThe study evaluated DGF and AR in highly sensitized patients and their effects on kidney function for six months post-transplantation.
MethodsWe enrolled 95 patients with kidney transplants from living donors who were divided into two groups. Group 1 included 47 highly sensitized patients with panel reactive antibody (PRA) < 20.0% and negative donor-specific antigen, and group 2 included 48 patients with negative PRA. All patients were followed for the state of DGF, AR, and kidney function for six months.
ResultsGroup 1 showed a significantly higher proportion of DGF and AR than group 2 (27.7% versus 2.1%, P < 0.001 and 14.9% versus 2.1%, P = 0.031, respectively). The rates of positive PRA in DGF and AR patients were significantly higher than those in non-DGF and non-AR patients (92.9% versus 42.0%, P < 0.001 and 87.5% versus 46.0%, P = 0.031, respectively). Transplanted kidney function was significantly worse in patients with PRA and DGF and/or AR than in patients with negative PRA and non-DGF and non-AR only in the seventh-day post-transplantation.
ConclusionsKidney transplant in highly sensitized patients with positive PRA was related to the increased ratio of DGF and AR.
Keywords: Graft Rejection, HLA Antigens, Delayed Graft Function -
Purpose
To determine the efficacy and safety of infliximab therapy in patients with HLA B-27-associated ocular inflammation resistant or intolerant to conventional immunomodulatory therapy.
MethodsThis was a retrospective observational case series. All cases were uveitic patients with positive HLA-B27, confirmed through HLA testing, resistant or intolerant to conventional immunomodulatory therapy. The primary outcome of the study was to identify the efficacy of infliximab determined by the control of inflammation, duration of remission, and the ability to reduce conventional immunomodulatory therapy. The secondary outcome was an improvement of two or more lines of best-corrected visual acuity (BCVA) on the Snellen visual acuity chart.
ResultsTwenty-four patients (38 eyes) were included in the study. All patients were followed for 24 months. Twenty-one (87.5%) patients completed 24 months of follow-up. Sixteen (66.7%) patients had active uveitis at the beginning of therapy. One patient out of these active patients had active inflammation at the end of follow-up period. Thirteen (87.5%) out of sixteen active patients were in steroid-free remission. The mean duration of treatment to induce remission was 16.5 months (range 6–24 months). Corticosteroid was stopped in 19 (90.5%) patients by the end of the study. At the end of the study, in patients who achieved remission, 14 (58.3%) patients were in remission on infliximab therapy and 6 (25%) patients were in remission off infliximab therapy. Of the 38 eyes, 8 (21.05%) showed improvement in BCVA (three eyes had successful cataract extraction with intraocular lens implantation during infliximab therapy with no subsequent inflammation), while 26 eyes (68.4%) had stable BCVA over the 24-month study period. The side effects included allergic reaction, fatigue, cellulitis, headache, restlessness, elevation of liver enzymes, and anemia. Two patients (n = 24, 8.3%) experienced severe adverse effects and the treatment was stopped prematurely in these two patients.
ConclusionInfliximab might induce and maintain the steroid-free remission in HLAB27- associated ocular inflammation in patients resistant or intolerant to conventional immunomodulatory therapy.
Keywords: HLA-B27, Immunomodulatory Therapy, Infliximab, TNF-α, Uveitis, Vasculitis -
Analysis of Single Nucleotide Polymorphisms in HLA-DRA, IL2RA, and HMGB1 Genes in Multiple SclerosisBackground
Multiple sclerosis (MS) is a common demyelinating neurodegenerative disorder with significant heritability. Previous studies have associated genetic variants in human leukocyte antigen (HLA) complex, IL2RA, and HMGB1 genes with the pathophysiology of MS.
MethodsIn order to investigate the gene association in the Iranian population, we performed a genotyping study of 36 variants in the mentioned genes using Sanger sequencing in 102 MS patients and 113 healthy controls.
ResultsOur results identified significant associations as well as significant allele frequency differences in some of the studied single-nucleotide polymorphisms including rs4935356, rs3177928, and rs7197 from HLA-DRA gene, and rs12722489 and rs12722490 variants from IL2RA gene (p< 0.05). Moreover, the strong linkage disequilibrium of two common haplotypes was estimated from the HLA-DRA gene.
ConclusionsThis association study may suggest the role of these polymorphisms in the genetic susceptibility of MS in the Iranian population and would facilitate the recognition of causative variants in this disease.
Keywords: HMGB1, HLA-DRA, IL2RA, Multiple sclerosis, Polymorphism -
سابقه و هدف
مطالعات حاکی از آن است که HLA-G در حفاظت جنین در برابر سیستم ایمنی مادر نقش دارد و پلی مورفیسم های بالادست این ژن احتمالا با تاثیر بر بیان آن، بر موفقیت حاملگی تاثیر می گذارد. مطالعه حاضر با هدف بررسی همراهی پلی مورفیسم rs1736933 بالا دست ژن HLA-G با اختلال سقط مکرر خودبخودی در جمعیت زنان استان آذربایجان شرقی انجام گرفت.
مواد و روش هااین مطالعه مورد- شاهدی بر روی 80 زن دارای حداقل یک فرزند و بدون هرگونه سابقه سقط و 100 زن دارای حداقل دو سابقه سقط مکرر خودبخودی پس از تایید متخصص زنان و زایمان انجام شد. مقدار 2 میلی لیتر خون از افراد شرکت کننده اخذ و پس از استخراج DNA، بخشی از پروموتر ژن HLA-G توسط PCR تکثیر و به وسیله الکتروفورز روی ژل آگارز بررسی شد. محصولات PCR تعیین توالی و ژنوتیپ افراد مشخص شد. فراوانی های آللی و ژنوتیپی گروه های بیمار و کنترل محاسبه و باهم مقایسه شدند.
یافته هادر این مطالعه فراوانی ژنوتیپ های CC، CA، AA در گروه بیمار به ترتیب 55 و 37 و 8 درصد و در گروه کنترل 37/75 و 41/25 و 20 درصد بدست آمد. مقایسه فراوانی های ژنوتیپی بین دو گروه نشان داد که ژنوتیپ هموزیگوت CC با سقط مکرر همراهی دارد (0/015=p). همچنین، بررسی آماری حاکی از تفاوت معنی دار فراوانی های آللی بین دو گروه بود (0/019=p).
نتیجه گیرینتایج این مطالعه نشان داد که چند شکلی rs1736933 واقع در بالادست ژن HLA-Gبا بیماری سقط مکرر در جمعیت زنان همراهی دارد.
کلید واژگان: سقط مکرر, پلی مورفیسم, HLA-G, مطالعات همراهیBACKGROUND AND OBJECTIVEStudies have suggested that HLA-G is involved in protecting the fetus against the motherchr('39')s immune system, and upstream polymorphisms of this gene may influence pregnancy success by effecting its expression. The aim of this study was to evaluate the association of upstream HLA-G gene polymorphism, rs1736933, with recurrent spontaneous abortion in East Azerbaijan women population.
METHODSThis case-control study was performed on 80 women with at least one child and without any history of abortion, and 100 women with at least two recurrent spontaneous abortions which were diagnosed by gynecologist. 2 ml of blood was obtained from the participants and after DNA extraction, a segment of the HLA-G gene promoter was amplified by PCR and analyzed by agarose gel electrophoresis. PCR products were sequenced and genotyped. Allelic and genotypic frequencies of patient and control groups were compared.
FINDINGSFrequency of AA, CA, CC genotypes in the patient group were 8(8%), 37(37%), 55(55%) and in the control group were 16(20%), 33(41.25%), 31(38.75%) respectively. Comparison of genotypic frequencies between the two groups showed that CC homozygous genotype was associated with recurrent abortion (p= 0.015). Statistical analysis also showed a significant difference between the allelic frequencies of the two groups (p= 0.019).
CONCLUSIONThe results of this study showed that the upstream HLA-G gene polymorphism, rs1736933, is associated with the recurrent abortion in East Azerbaijan women population.
Keywords: Recurrent Abortion, Polymorphism, HLA-G, Association Studies
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