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جستجوی مقالات مرتبط با کلیدواژه « Enterobacteriaceae » در نشریات گروه « پزشکی »

  • حیدر موسوی، زهرا مولائی، عظیم اکبرزاده خیاوی، هاجر بدری، اسماعیل نجفی، سعید پرستار، شهرام نظری*
    سابقه و هدف

    بومادران یکی از گیاهان دارویی متعلق به خانواده آستراسه است که کاربرد زیادی در علوم پزشکی دارد. در بین گیاهان دارویی شاید کم تر گیاهی را بتوان همانند گیاه بومادران یافت که از نظر شهرت، گستره دسترسی در نواحی مختلف جهان و وسعت، کابرد داشته باشد. هدف از مطالعه حاضر سنتز عصاره بومادران و بررسی اثرات ضد باکتریایی آن بر روی گروهی از باکتری های روده ای و مقایسه خواص ضد باکتریایی آن با فنل می باشد.

    مواد و روش ها

    این مطالعه به صورت تجربی در اردیبهشت سال1402 در آزمایشگاه میکروبیولوژی دانشکده علوم پزشکی خلخال انجام گردید. اندام های هوایی گیاه بومادران نانسی با شماره هرباریوم 1753 از دامنه کوه های اردبیل تهیه و پس از تعیین هویت، عصاره این گیاه با روش هیدرو الکلی استخراج شد. در این روش پس از تهیه گیاه و خشک نمودن اندام های هوایی گیاه، مقدار g10 از آن در یک هاون استریل خرد شد، سپس در ارلن ریخته شده و مقدار mL50 اتانول 100 درصد به آن اضافه گردید. پس از 24 ساعت اختلاط در دستگاه همزن مغناطیسی با استفاده از قیف بوخنر دارای کاغذ صافی واتمن و پمپ خلاء، اجزای باقیمانده گیاه جدا گردید. سپس مقدار معینی آب مقطر (mL 20) به محلول مورد نظر اضافه و دوباره در دستگاه همزن مغناطیسی با دمای 80 درجه سانتی گراد، قرار داده شد تا الکل به طور کامل از راکتور خارج شود. اثر ضد باکتریایی عصاره گیاه بومادران به روش انتشار دیسک و میکرو براث دایلوشن (micro broth dilution) بر روی گونه های استاندارد باکتری های خانواده انتروباکتریاسیه شامل سویه های باکتریاییکلبسیلا پنومونیه (ATCC:10031)، اشرشیاکلی (ATCC: 23591)، شیگلا دیسانتری (ATCC:25922) و انتروباکتر آئروژنز (ATCC:13048) انجام شد. تمامی آزمایشات براساس دستورکارهای موسسه استانداردهای آزمایشگاهی و بالینی (Clinical and Laboratory Standards Institute: CLSI) انجام گردید.

    یافته ها

     در مطالعه حاضر با افزایش غلظت عصاره بومادران، میزان رشد باکتری ها کاهش یافت. مقدار حداقل غلظت بازدارندگی (Minimum Inhibitory Concentration: MIC) عصاره بومادران برای باکتری های کلبسیلا پنومونیه و آنتروباکتر آئروژنز برابر 25/6 درصد و برای باکتری های شیگلا دیسانتری و اشرشیاکلی به ترتیب برابر 5/12 و 25 درصد به دست آمد. هم چنین مقدار حداقل غلظت کشندگی (MBC Minimum Bactericidal Concentration:) عصاره بومادران برای باکتری های شیگلا دیسانتری، کلبسیلا پنومونی و آنتروباکتر آئروژنز برابر 25 درصد و برای اشرشیاکلی برابر50 درصد به دست آمد. نتایج حاصل از MIC وMBC نشان می دهد که حساس ترین باکتری به عصاره بومادران در بین باکتری های مورد مطالعه انتروباکتر آئروژنز و مقاوم ترین آن اشرشیا کلی می باشد. قطر هاله عدم رشد برای باکتری های شیگلا دیسانتری، اشرشیاکلی، کلبسیلا پنومونیه و آنتروباکتر آئروژنز به ترتیب 19، 18، 20 و 23 میلی متر به دست آمد. این آزمایش نیز نشان داد که باکتری های انتروباکتر آئروژنز حساس ترین و اشرشیاکلی مقاوم ترین باکتری در بین باکتری های مورد بررسی می باشد. مقایسه خاصیت ضدباکتریایی عصاره بومادران با فنل، نشان داد که عصاره بومادران نسبت به فنل در زمان های 5 ،10 و 15 دقیقه زمان تماس در غلظت های پایین تر نیز اثر باکتری کشی داشت. در این آزمایش مقاوم ترین باکتری شیگلا دیسانتری و حساس ترین باکتری اشرشیاکلی و انتروباکتر آئروژنز می باشد. علت این که نوع باکتری مقاوم و حساس در روش مقایسه اثر ضدباکتریایی عصاره بومادران با فنل با نتایج حاصل از آزمایشات MIC ، MBC و قطر هاله عدم رشد کمی متفاوت بود، احتمالا مربوط به کاهش زمان تماس عصاره با باکتری می شود.

    استنتاج

    نتایج پژوهش کنونی نشان داد که عصاره هیدروالکلی گیاه بومادران در حذف باکتری های گرم منفی روده ای بسیار موثر است. هم چنین عصاره هیدروالکلی گیاه بومادران در حذف باکتری های گرم منفی نسبت به فنل موثرتر است

    کلید واژگان: بومادران, اثر ضدباکتریایی, عصاره هیدروالکلی, باکتری های روده ای, فنل}
    Heydar Mousavi, Zahra Molaei, Azim Akbar Zadeh Khiavi, Hajar Badri, Esmail Najafi, Saeed Parastar, Shahram Nazari*
    Background and purpose

    Yarrow is a member of the Asteraceae family, utilized extensively in the field of medical sciences. Among the medicinal plants, one may encounter few specimens like the aforementioned plant, which enjoys widespread distribution across various regions of the globe and boasts a diverse array of uses that contribute to its renown. The aim of the present study was the synthesis of Yarrow extract evaluation of its antibacterial effects on a group of intestinal bacteria and comparing its antibacterial properties with phenol.

    Materials and methods

    In this experimental study, Yarrow plant extract was extracted with the hydroalcoholic method. The aerial parts of Achillea ageratum plant with herbarium number 1753 were prepared from the slopes of Ardabil mountains and after determining the identity, the extract of this plant was extracted by hydroalcoholic method. In this method, after preparing the plant and drying the aerial parts of the plant, 10 g of it was crushed in a sterile mortar, then it was poured into an Erlenmeyer flask, and 50 mL of 100% ethanol was added to it. After 24 hours of mixing in a magnetic stirrer using a Buchner funnel with Whatman filter paper and a vacuum pump, the remaining components of the plant were separated. Then, a certain amount of distilled water (20 ml) was added to the desired solution and placed again in the magnetic stirrer whose temperature was set at 80 degrees Celsius, so that the alcohol was completely removed from the reactor. The Antibacterial effect of yarrow extract was performed by disc diffusion method and micro broth dilution on standard species of Enterobacteriaceae families including the standard bacterial strains of Klebsiella pneumoniae (ATCC:10031), Escherichia coli (ATCC:23591), Shigella dysentery (ATCC:25922) and Enterobacter aerogenes (ATCC:13048). All experiments were performed according to the Clinical and Laboratory Standards Institute (CLSI) guidelines.

    Results

    In the present study, the growth rate of bacteria decreased by increasing the concentration of yarrow extract. The MIC of Yarrow plant extract for Klebsiella pneumonia and Enterobacter aerogenes was obtained in %6.25 and for Shigella dysentery and Escherichia coli was obtained in %12.5 and %25, respectively. Also, the MBC of extract for Shigella dysentery, Klebsiella pneumonia, and Enterobacter aerogenes bacteria was obtained in 25%, and for Escherichia coli it was obtained in 50%. The results of MIC and MBC show that the most sensitive bacteria to yarrow extract among the studied bacteria is Enterobacter aerogenes and the most resistant is Escherichia coli. The diameter of the inhibition zone for Shigella dysentery, Escherichia coli, Klebsiella pneumoniae, and Enterobacter aerogenes bacteria was obtained at 19, 18, 20, and 23 mm, respectively. In this experiment, Enterobacter aerogenes bacteria were the most sensitive and Escherichia coli was the most resistant among the investigated bacteria. Comparative investigation of the antibacterial properties of yarrow extract with phenol, showed that yarrow extract had a lower killing effect than phenol at 5, 10, and 15-minute contact time. In this test, the most resistant bacteria are Shigella dysentery and the most sensitive bacteria are Escherichia coli and Enterobacter aerogenes. The reason that the type of resistant and sensitive bacteria was slightly different in the method of comparing the antibacterial effect of yarrow extract with phenol with the results of MIC, MBC, and non-growth halo diameter is related to the reduction of contact time of the extract with bacteria.

    Conclusion

    The results of the present research show that the hydroalcoholic extract of the yarrow plant is very effective in the removal of gram-negative intestinal bacteria. Also, the hydroalcoholic extract of the yarrow plant is more effective in removing gram-negative bacteria than phenol

    Keywords: Yarrow, Antibacterial Effect, Hydroalcoholic Extract, Enterobacteriaceae, Phenol}
  • Hedieh Moradi Tabriz, Sepideh Rastgufar, Elham Nazar *, Leyla Pourgholi, MohammadAli Boroumand
    Background

    Carbapenemase-resistant Enterobacteriaceae is a major threat to public health. These microorganisms are resistant to all types of beta-lactam antibiotics.

    Methods

    This cross-sectional study was conducted on 51 Enterobacteriaceae isolates from clinical samples in Sina Hospital and Tehran Heart Center in Iran from 2016 to 2018. Antibiotic susceptibility test was performed by disk diffusion method. Carbapenem-resistant isolates were identified by the Modified Hodge Test (MHT) and Polymerase Chain Reaction (PCR) for surveying the presence of VIM, NDM, IMMP, and OXA-48 genes.

    Results

    Out of 51 clinical samples, 38 isolates were positive for both MHT and PCR tests, and 5 isolates were negative in both tests. The results of both tests are similar in 84.3% of the isolates.

    Conclusion

    The MHT is an appropriate and easy method for approving carbapenemase production. Also, a laboratory can detect the carbapenemase production by identification of the KPC genes.

    Keywords: Carbapenemase-resistant, Enterobacteriaceae, Poly-merase chain reaction}
  • زین العابدین بزازو ال اوازانی، هدی بنیشا، لیلا رکلاوی، رجائی ال لودانه، سعید باریجال*
    زمینه و اهداف

      از زمانی که برای اولین بار در سال 2015 گزارش شد، ژن مقاومت به کولیستین متحرک (mcr-1) در تعداد فزاینده ای در سراسر جهان یافت شد. با این حال، تنها چند مطالعه در مراکش انجام شده است. در اینجا، هدف ما بررسی شیوع مقاومت به کولیستین و ژن های شبه mcr در بین جدایه های بالینی انتروباکتریاسه از شمال غرب مراکش بود.

    مواد و روش کار

      شیوع مقاومت به کولیستین در بین 338 ایزوله بالینی انتروباکتریاسه بررسی شد. این جدایه ها بین دسامبر 2020 و می 2021 از شهرهای طنجه و تطوان جمع آوری شدند. جدایه ها شامل اشریشیا کلی (E. coli)، کلبسیلا پنومونیه (K. pneumoniae)، Enterobacter spp، Citrobacter freundii (C. freundibil) و Proteus mirabilis (P. mirabilis) بودند. تست های حساسیت آنتی باکتریایی با استفاده از روش انتشار دیسک و غلظت های مهاری حداقل (MIC) انجام شد. تمام جدایه هایی که به کولیستین مقاوم بودند، برای غربالگری ژن های شبه mcr (mcr-1 تا mcr-5) تحت روش های PCR و توالی یابی قرار گرفتند.

    یافته ها

      22/78 درصد از جدایه ها مقاوم به چند دارو (MDR) بودند که در این میان 57/14 درصد از جدایه های P. mirabilis، 30 درصد از جدایه های انتروباکتر، 22/22 درصد از جدایه های K. pneumoniae و 22/05 درصد از ایزوله های E. coli isol. مقاومت به کولیستین در 51 مورد از 338 جدایه، از جمله 33 E. coli، 11 K. pneumoniae، و 7 P. mirabilis یافت شد. ژن mcr-1 در 3 جدایه E. coli شناسایی شد. ژن های Mcr-2 تا mcr-5 در این مطالعه وجود نداشتند. توالی یابی آمپلیکون های PCR شباهت 99 تا 100 درصدی را با ژن mcr-1 نشان داد.

    نتیجه گیری

      این اولین مطالعه ای است که در مراکش برای بررسی شیوع مقاومت به کولیستین در بین ایزوله های بالینی انجام شده است و اولین سه ژن mcr-1 را نشان می دهد که در مراکش در گردش هستند. این می تواند منجر به انتشار این ژن ها در سراسر مراکش شود.

    کلید واژگان: کولیستین, انتروباکتریاسه, اشریشیا کلی, ژن MCR, مراکش}
    Zine Elabidine Bzazou El Ouazzani, Houda Benaicha, Laila Reklaoui, Rajae Alloudane, Said Barrijal*
    Background and Aim

     Since first reported in 2015, the mobile colistin resistance (mcr-1) gene has been found in increasing numbers worldwide. However, only a few studies have been carried out in Morocco. Herein, we aimed to investigate the prevalence of colistin resistance and mcr-like genes among Enterobacteriaceae clinical isolates from the North-West of Morocco.

    Materials and Methods

     The prevalence of colistin resistance was investigated among 338 Enterobacteriaceae clinical isolates. These isolates were collected from Tangier and Tetouan cities between December 2020 and May 2021. The isolates included Escherichia coli (E. coli), Klebsiella pneumoniae (K. pneumoniae), Enterobacter spp, Citrobacter freundii (C. freundii), and Proteus mirabilis (P. mirabilis). Antibacterial susceptibility tests were performed using disc diffusion assay and minimal inhibitory concentrations (MIC). All isolates that were found resistant to colistin were subjected to PCR and sequencing techniques to screen them for the presence of mcr-like genes (mcr-1 to mcr-5).

    Results

     22.78% of isolates were multidrug-resistant (MDR), among which 57.14% of P. mirabilis isolates, 30% of Enterobacter spp isolates, 22.22% of K. pneumoniae isolates, and 22.05% of E. coli isolates. Colistin resistance was found in 51 of 338 isolates, including 33 E. coli, 11 K. pneumoniae, and 7 P. mirabilis. The mcr-1 gene was detected in 3 E. coli isolates. Mcr-2 to mcr-5 genes were absent in this study. Sequencing of PCR amplicons revealed 99–100% similarity to mcr-1 gene.

    Conclusion

     This is the first study conducted in Morocco to investigate the prevalence of colistin resistance among clinical isolates, and it has revealed the first three mcr-1 genes circulating in Morocco. This could lead to the dissemination of these genes throughout Morocco.

    Keywords: Colistin, Enterobacteriaceae, Escherichia coli, MCR genes, Morocco}
  • Houri Alizadeh, Alireza Khodavandi*, Fahimeh Alizadeh, Nima Bahador
    Background

    The emergence of resistant Enterobacteriaceae and the abundance of antibiotic-resistant genes is one of the major problems of the global health system. The present study aimed to determine the phenotypic and genotypic expression levels of metallobetalactamase coding genes (blaVIM, blaNDM, blaIMP, blaSIM, blaSPM, and blaGIM) in Enterobacteriaceae isolates (Escherichia, Enterobacter, Citrobacter, Klebsiella, and Serratia) from patients referred to the clinical centers in Isfahan city and typing of these isolates.

    Materials and Methods

    Enterobacteriaceae isolates were identified and isolated after sample collection. Antibiotic sensitivity pattern was investigated by disk diffusion method. MIC was performed in carbapenem-resistant isolates by the E-test method, and the frequency of strains with multidrug resistance was determined. The presence of metallobetalactamase genes was investigated phenotypically using a combined disk test and modified Hodge test. The genotypic identification of the above genes was done by PCR and sequencing techniques. Finally, PCR based on the sequence of repetitive elements was performed for molecular typing of metallobetalactamase-producing Enterobacteriaceae.

    Results

    In the present study, 580 isolates of Enterobacteriaceae were isolated by examining 3500 samples. Klebsiella and Escherichia were the most common isolates, and the frequency of MDR was 60% in Klebsiella and 59.53% in Escherichia. Moreover, MIC results showed that 33.7% Klebsiella, 4.1% Escherichia, 5.7% Enterobacter, 3.5% Citrobacter, and 5.5% Serratia were resistant to carbapenems. Frequency of isolates with multidrug resistance in Escherichia (MDR 59.53% and XDR 1.5%), Klebsiella (MDR 60%, XDR% 3 and PDR 0.8%), Enterobacter (MDR 44%), Citrobacter (MDR 53.5%) and Serratia (MDR 55.5%) were reported. Metallobetalactamase production was confirmed by phenotypic analysis in Escherichia (1.8%) and Klebsiella (10.4%). Genotypic tests showed that blaSIM, blaSPM, and blaGIM genes were absent in any Enterobacteriaceae isolates. The presence of blaVIM, blaIMP, and blaNDM genes was confirmed in 6.2% of Klebsiella isolates and 1.3% of Escherichia isolates. The frequency of detected metallobetalactamase genes in Klebsiella and Escherichia isolates was 4.58% and 1.39% for blaVIM, 0.83% and 1.39% for blaIMP and 0.83% and 1.39% for blaNDM. The rep-PCR results showed that 11 metallobetalactamase-producing Klebsiella isolates are in 4 main groups, and 9 Escherichia isolates and 4 Enterobacter isolates are classified in two main clusters.

    Conclusion

    The present study shows the prevalence of Klebsiella and Escherichia isolates and their resistance to metallobetalactamase-producing Enterobacteriaceae. These genes in the horizontal transfer of antibiotic resistance identification of metallobetalactamase-producing isolates in clinical environments are essential to reduce the spread of antibiotic resistance. The high homology of resistant isolates of Enterobacteriaceae in clinical samples indicates the high power of these genotypes in causing infection in hospitalized patients, which can play an important role in increasing antibiotic resistance.

    Keywords: Enterobacteriaceae, Carbapenem, Metallobetalactamase enzyme, Phenotype, Genotype}
  • آزاده فروغی*، کیقباد قدیری، آرزو بزرگ امید، رویا چگنه لرستانی، سمیه جعفری
    پیش زمینه و هدف

    Escherichia albertii یک باکتری گرم منفی و بی هوازی اختیاری است که در سال های اخیر به عنوان عامل ایجادکننده اسهال جدا شده است. به دلیل نبود اطلاعات کافی در مورد خصوصیات فنوتیپی و بیوشیمیایی این باکتری، تشخیص آن از سایر گونه های انتروباکتریاسه به ویژه پاتوتیپ های اشریشیا کلی دشوار است. لذا هدف از این مطالعه بررسی شیوع E. albertii در نمونه ادرار و مدفوع بیماران مراجعه کننده به بیمارستان های کرمانشاه با استفاده از روش های کشت و مولکولی می باشد.

    مواد و روش کار

    400 نمونه با فنوتیپ تایید شده به عنوان انتروباکتریاسه جمع آوری شد و پس از کشت مجدد و انجام تست های بیوشیمیایی، در نهایت کلنی های سفید روی XRM-McConkey آگار (مشکوک به E. albertii) انتخاب و با استفاده از پرایمر اختصاصی برای ژن cdt  (Eacdt) مورد تست PCR قرار گرفتند.

    یافته ها

    تنها 5 نمونه (25/1%) در کشت نهایی روی XRM-MacConkey آگار مثبت بودند. هیچ یک از آنها در PCR به عنوان E. albertii تایید نشد.

    بحث و نتیجه گیری

    به نظر می رسد استفاده از پرایمر اختصاصی Eacdt برای تشخیص این باکتری کارآمد نباشد. با این حال، مطالعات بیشتری برای تایید آن توصیه می شود.

    کلید واژگان: اشرشیا آلبرتی, انتروباکتریاسه, ادرار, مدفوع, کرمانشاه, PCR}
    Azadeh Foroughi*, Keyghobad Ghadiri, Arezoo Bozorgomid, Roya Chegeneh Lorestani, Somayeh Jafari
    Background & Aims

    Escherichia albertii is a gram-negative and facultatively anaerobic bacterium that has been isolated as a causative agent of diarrhea in recent years. Due to the lack of sufficient information on the phenotypic and biochemical characteristics of this bacterium, it is difficult to distinguish it from other species of the Enterobacteriaceae, especially Escherichia coli pathotypes. So, the aim of this study was to evaluate the prevalence of E. albertii in the urine and stool samples of patients with urinary tract and gastrointestinal tract infection in Kermanshah hospitals using culture and molecular methods.

    Materials & Methods

    Four hundred samples consisted of 200 urine and 200 stool samples confirmed as Enterobacteriaceae phenotypically were collected. After subculture and biochemical tests, finally white colonies on XRM-McConkey agar (suspected to be E. albertii) were selected and subjected to PCR using specific primer for cdt gene (Eacdt). SPSS version 16 software was used for the statistical analysis of the data, and the p-value less than 0.05 was considered statistically significant.

    Results

    Only 5 samples (1.25%) were positive in the final culture on XRM-MacConkey agar. None of them were then confirmed as E. albertii by the PCR.

    Conclusion

    According to the phenotypic isolation of this bacterium in present study and previous studies on the prevalence of it, it seems that the use of Eacdt specific primer is not efficient for the detection of this bacterium. However, further studies are recommended to confirm it.

    Keywords: Enterobacteriaceae, Escherichia Albertii, Kermanshah, PCR, Stool, Urine}
  • Naveed Mansoori *, Shaheer Zafar, Muhammad Abdul Ahad, Sana Javed, Syed Mubeen
    Background

    Onychophagia, commonly known as nail biting, is considered a compulsive behavioral disorder primarily observed in children and adolescents. Nail biting behavior leads to an increased presence of various opportunistic microorganisms in the oral cavity. This study aimed to investigate the association between nail biting and mental health in children aged 10 to 16 years. It further compares the load of Enterobacteriaceae in nail-biters and non-nail biters.

    Methods

    A case control study was conducted on 50 nail biters (cases) and 50 non-nail biters (controls). Data were collected by using convenient sampling technique from school going students aged 10 to 16 years, using pre-designed and self-administered questionnaires, the Massachusetts General Hospital-Nail Biting Questionnaire (MGH-NBQ) and the Strengths and Difficulties Questionnaire (SDQ) as well as saliva samples taken and tested for bacterial growth. All ethical issues were taken into consideration. SPSS v23 was used to analyze the data using descriptive statistics to calculate the mean and standard deviation. The independent t test was used to compare mean SDQ scores between nail biters and non-nail biters. P-values<0.05 were considered statistically significant.

    Results

    Among the 50 cases, 44 (88.0%) of the students had positive Enterobacteriaceae growth, while 13 (26.0%) of thecontrols did not. Nail biters had considerably higher mean scores for emotional symptoms, conduct problems, hyperactivity, and peer problems than non-nail biters (P value<0.001). All of the SDQ domains and nail biting were found to have a statistically significant (P=0.05) association.

    Conclusion

    The study highlights the persistent and burdensome nature of nail biting, which poses risks in terms of disease transmission. Additionally, nail biting has been associated with various behavioural and emotional disorders. Awareness of the harmful consequences of nail biting, along with appropriate preventive and treatment approaches, can assist young individuals in discontinuing this habit.

    Keywords: Nail Biting, Child, Enterobacteriaceae, mental health}
  • Shiva Ahmadipour Sereshkeh, Siavosh Salmanzadeh Ahrabi, Azam Khosroabadi, Roxana Mansour Ghanaiee *, Abdollah Karimi, Masoud Alebouyeh
    Background

     Widespread and inappropriate use of antibiotics has led to an increase in antibiotic-resistant bacteria worldwide. Extended-spectrum β-lactamases (ESBLs) are among the most important resistance mechanisms in members of Enterobacteriaceae, which can pose a threat to patients.

    Objectives

     This study aimed to investigate the carrier status and alteration in the fecal transmission of ESBL-producing Enterobacteriaceae (ESBL-E) on admission and during the hospital stay, as well as its correlation with the usage of antibiotics among children in a pediatric intensive care unit (PICU). Molecular typing between the primary and secondary isolates was done to detect the homotypic clonal strains.

    Methods

     Demographic and medical data of PICU children were collected, and the carrier status of ESBL-E was investigated in pairs of their rectal swab samples at the admission and discharge time. Detection of ESBL phenotype and antimicrobial susceptibility to 12 antibiotics were performed by double-disk synergy and disc diffusion methods, respectively. Polymerase chain reaction for detection of blaTEM, blaSHVblaPER, blaCTX-M, and blaVEB genes was performed using specific primers. The phylogenetic relations were analyzed by the enterobacterial repetitive intergenic consensus-polymerase chain reaction (ERIC-PCR) method.

    Results

     Extended-spectrum β-lactamase-producing Enterobacteriaceae was detected in 48% of the samples at admission and 42% at discharge time. The highest frequency of resistance was observed in cephazolin, amoxicillin-clavulanic acid, and ampicillin. Children with a history of meropenem administration showed a significantly higher frequency of meropenem resistance Enterobacteriaceae in their samples. Moreover, the administration of metronidazole increased the isolation of ESBL-Escherichia species in hospitalized children. The most common gene associated with the ESBL phenotype was blaCTX-M, while blaPER and blaVEB were not detected in the ESBL-E isolates. The phylogenetic analysis did not confirm the occurrence of the cross-transmission of ESBL-E in the patients during hospitalization.

    Conclusions

     Our results showed a high frequency of ESBL-E in the feces of children upon admission to the PICU, which did not change significantly during the hospital stay. Although the prescription of metronidazole showed an association with the enrichment of ESBL-E due to observed diversity in the molecular types and resistance phenotypes of the isolates, the community seems to be the primary source of ESBL-E transmission in children. Further investigations are needed to understand the role of hospital stay in the colonization and enrichment of ESBL-E in the intestinal tract of children and their association with infections during the medical interventions in the PICU.

    Keywords: Enterobacteriaceae, Extended-Spectrum Beta-Lactamase, Pediatric Intensive Care Unit, ERIC-PCR}
  • Parvin Askari, Atiyeh Khosravi, Sedigheh Rastaghi, Gholamreza Faal, MohammadHasan Namaei *
    Background

    The goal of this project was to assay the prevalence of fecal carriage of ESΒL-producing Enterobacteriaceae (ESΒL-PE), and to identify the risk factors for carriage in neonates hospitalized in a Neonatal Intensive Care Unit (NICU) of an educational therapeutic hospital (Vali-e-Asr) of Birjand city, east of Iran.

    Methods

    Rectal swabs were taken from 200 neonates at the beginning of hospitalization, every week in case of hospitalization and at the time of discharge. Bacterial isolates were identified using different biochemical experiments. Screening of ESΒL-PE was first done by phenotypic test (DD test) and then antibiotic resistance genes were detected by PCR assay.

    Results

    In our research, 42 Enterobacteriaceae were obtained from 200 neonates. The total prevalence rate of neonatal rectal carriage of ESΒL-PE was 42/200 (21%), mostly Escherichia coli, 18 (42.8%). blaCTX-M and blaCTX-M-15 were the most prevailing β-lactamase-encoding genes recognized by PCR tests. Intestinal carriage of ESβL among neonates displayed a statistically significant relationship with the use of the mechanical ventilation (p=0.025), APGAR score (p=0.005) and gestational age (weeks) (p=0.044).

    Conclusion

    Our findings highlighted the importance of consistent screening for resistant ESΒL-PE among neonates (especially preterm newborns) and minimizing invasive ventilation whenever possible.

    Keywords: Enterobacteriaceae, Extended-spectrum beta-lactamase, Intestinal carriage, Iran, Neonate, NICU}
  • Shahnaz Armin, Leila Azimi, Ghazal Shariatpanahi *, Armin Shirvani, Nasim Almasian Tehrani
    Background

     Carbapenems are broad-spectrum antibiotics used to treat the family of gram-negative Enterobacteriaceae, especially those that are resistant to first-line antibiotics. Because these drugs are usually prescribed as the last line of treatment, resistance to these antibiotics carries irreparable risks to treatment systems, and screening high-risk individuals in medical centers and using infection control measures are critical strategies for eliminating them.

    Objectives

     We investigated the prevalence of colonization of different strains of Enterobacteriaceae, Klebsiella, Enterobacter, and Escherichia coli and their risk factors in hospitalized children.

    Methods

     In this descriptive cross-sectional study, stool samples were taken from patients during the first 48 hours of hospitalization in a tertiary children’s hospital and were cultured on Makcanki culture medium or EMB. Cultured Enterobacteriaceae samples were transferred to Müller-Hinton agar medium, and their antibiotic susceptibility was evaluated with meropenem and imipenem discs by disc diffusion method. In the next step, five common carbapenemase genes, including (VIM, IMP, OXA-48, NDM-1, and SPM-1) were examined by PCR method and reported accordingly.

    Results

     Two hundred and ninety-five stool samples were examined, of which 242 (82%) samples were cultured positively with Enterobacteriaceae. The prevalence of carbapenem resistance was reported to be 37% among 295 samples using the phenotypic method. Resistance rates were high in patients with a history of antibiotic use, with frequent hospitalizations (more than two episodes in the last six months), and in patients with an underlying disease) malignancy, GI diseases, immunodeficiency, neurologic diseases such as cerebral palsy and epilepsy, endocrine diseases. Most of the genes found were OXA-48, followed by IMP and VIM. NDM-1 was found in 3 samples, and SPM was not found in any of the samples. In 13% of resistant samples, more than one carbapenemase gene was found.

    Conclusions

     The results of this study showed that the frequency of carbapenem resistance in stools colonized with Enterobacteriaceae is high in our patients. On the other hand, the presence of carbapenemase genes in these bacteria, which are located on the plasmids that can be rapidly spread in the hospital environment, is an alarm for the hospital infection control committee to take preventive measures in order to prevent the spread of these bacteria in the hospital.

    Keywords: Enterobacteriaceae, Carbapenem, Screening, Colonization}
  • Nima Davari, Reza Khashei *, Bahman Pourabbas, Vajiheh Sadat Nikbin, Farid Zand
    Objective (s)

    The worldwide emergence of carbapenem-resistant Enterobacteriaceae (CRE) has become a major therapeutic concern to medical institutions. To date, no study has determined the frequency and risk factors of inpatients with CRE fecal carriage in Southern Iran. We studied the features of carbapenemase-producing Enterobacteriaceae (CPE) collected from the central ICU of a university hospital.

    Materials and Methods

    Totally, 173 samples, including 124 stool samples from 46 ICU inpatients on admission and different follow-ups, 9 ICU staff, and 40 environmental samples were included. CRE was identified using microbiological methods. Antimicrobial susceptibility was investigated by using the disk diffusion method and E-test. Carbapenemase producers were detected using the mCIM method. Seven carbapenemase genes were characterized. The genetic relationship among 20 CPE was elucidated by PFGE. 

    Results

    The overall fecal carriage rate was 28.2%, while CRE acquisition was 6.1%. CRE were classified as Klebsiella pneumoniae (71.4%), Escherichia coli (23.8%), and Enterobacter aerogenes (4.8%). From 21 CRE, 20 (95.2%) produced carbapenemases, of which 10, 15, 10, 25, 5, and 65% were blaKPC, blaSME, blaIMP, blaVIM, blaNDM and blaOXA-48-positive, respectively. Out of 20 CPE, 14 different PFGE patterns were observed, categorized into six clusters, suggestive of non-clonal spread. No difference between the examined risk factors with CRE carriage was shown. 

    Conclusion

    The data indicate a high CRE fecal carriage rate among inpatients. Our findings implicate the widespread of OXA-48 carbapenemase together with heterogeneity among CRE with great concern for dissemination and therapeutic threat. Early diagnosis and monitoring of CRE among inpatients are urgent.

    Keywords: Antibiotic resistance, Carbapenemase, Enterobacteriaceae, Fecal carrier, PFGE}
  • گلنار رحیم زاده، محمدصادق رضایی*
    مقدمه

    ظهور انتروباکترهای تولیده کننده ی کارباپنماز و بتالاکتاماز وسیع الطیف یک تهدید برای سلامت جهانی می باشد. تشخیص سریع و صحیح این سویه ها جهت کنترل عفونت های بیمارستانی و درمان صحیح نقش کلیدی دارد. در این مطالعه روش های تشخیص انتروباکترهای مولد کارباپنماز و بتالاکتاماز وسیع الطیف با تمرکز بر خلاصه تکنیک های مبتنی بر کشت و روش های مولکولی مورد بررسی قرار گرفته است.

    روش ها

    مطالعه ی حاضر از نوع مروری است. که در آن مقالات منتشر شده طی سال های 1381 تا 1401 در پایگاه های معتبر بین المللی Scopus ، PubMed، Scholar Google، Science Direct، Web of Science جستجو گردید.

    یافته ها

    برای شناسایی انتروباکترهای تولیده کننده ی کارباپنماز و بتالاکتاماز وسیع الطیف روش های مرسوم کشت، روش های بیوشیمیایی، طیف سنجی جرمی، روش های مولکولی، توالی یابی نسل بعدی، ریز آرایه ها، توالی یابی کل ژنوم، سیستم مبتنی بر هیبریداسیون، سنجش ید نشاسته، ایمونوکروماتوگرافی، رنگ سنجی، طیف سنجی جرمی، سنجش الکتروشیمیایی و فلوسایتومتری مورد استفاده می باشند.

    نتیجه گیری

    (matrix-assisted laser desorption ionization-time of flight) MALDI-TOF، توالی یابی نسل بعدی و توالی یابی کل ژنوم از جمله تکنیک های نوین و منتخب جهت تشخیص و شناسایی انتروباکترهایتولیده کننده ی کارباپنماز و بتالاکتاماز وسیع الطیف می باشند.

    کلید واژگان: کارباپنماز, بتالاکتامازها, انتروباکتر, تکنیک های فنوتیپی, تکنیک های مولکولی}
    Golnar Rahimzadeh, MohammadSadegh Rezai *
    Background

    The emergence of Extended-Spectrum Beta-Lactamase- and Carbapenemase- Producing Enterobacteriaceae is a threat to global health. Fast and accurate detection of these strains plays a key role in controlling nosocomial infections and effective treatment. In the present study, the detection methods of carbapenemase and broad-spectrum β-lactam-producing Enterobacteriaceae have been investigated, focusing on the summary of culture-based techniques and molecular methods.

    Methods

    The present study is a narrative review. The articles published between 2000 and 2022 were searched in international authoritative databases namely Scopus, PubMed, Scholar, Google, Web of Science, Science direct.

    Findings

    To identify Extended-Spectrum Beta-Lactamase- and Carbapenemase-Producing Enterobacteriaceae, conventional culture methods, biochemical methods, mass spectrometry, molecular methods, next generation sequencing, microarrays, whole genome sequencing, hybridization-based system, starch iodine assay, immunochromatography, colorimetry, mass spectrometry, electrochemical measurement, and flow cytometry were used.

    Conclusion

    For the detection of Extended-Spectrum Beta-Lactamase- and Carbapenemase-Producing Enterobacteriaceae, MALDI-TOF (matrix-assisted laser desorption ionization-time of flight), next-generation sequencing and whole genome sequencing are among the new and selected techniques.

    Keywords: Carbapenemase, Beta-Lactamases, Enterobacteriaceae, Phenotypic techniques, Molecular diagnostic technique}
  • Amirmohammad Vaezi, Nazanin Ataee, Masoud Chaboksavar, Rasul Saberi

    Urinary tract infection is one of the most common bacterial infections affecting human health. Since Enterobacteriaceae bacteria are common causes of urinary tract infections, this study aimed to determine the frequency and pattern of Enterobacteriaceae antibiotic resistance in patients with urinary tract infections to prevent increased antibiotic resistance of these bacteria and prevent increased treatment costs. This cross-sectional analytical study was performed on 3 different age groups of Clienteles referred to Valiasr Clinic Laboratory in Mashhad. Detection of bacterial species was performed using conventional microbiological methods and biochemical tests, and according to the instructions of the Institute of Clinical and Laboratory Standard 2021, the pattern of antibiotic resistance of isolates was evaluated by the disk diffusion method. Out of 438 urine cultures with positive results in terms of Enterobacteriaceae, Escherichia coli with a prevalence of 76.7%, Klebsiella 14.4%, Enterobacter 4.3%, Proteus 3%, and other bacterial species with a prevalence of 1.6% Were observed. Bacterial isolates showed the lowest antibiotic resistance against Piperacillin-Tazobactam (13%) and Amikacin (17.2%), and also had the highest antibiotic resistance against Cefazolin (81.5%) and Co-trimoxazole (62.5%). Due to the frequency of urinary tract infections and to prevent their serious complications, it is necessary to study the pattern of regional antibiotic resistance in medical centers for effective and timely treatment. Therefore, it is recommended that Amikacin and Piperacillin-Tazobactam antibiotics be considered for the experimental treatment of urinary tract infections caused by Enterobacteriaceae.

    Keywords: Urinary tract infection, Enterobacteriaceae, Escherichia coli, Antibiotic pattern, Urinary culture}
  • Omowumi Akinola*, Faustina Onyeaghasiri, Olayinka Oluranti, Olayinka Elutade
    Background and Objectives

    Unsafe water supplies are of public health concern, especially in developing countries. This article aims to investigate the microbiological quality of water from eight Wells in Iwo and to explore for the extended-spectrum β-lactamase (ESBL) and carbapenemase genes contained in isolated enteric bacteria from in the water samples.

    Materials and Methods

    Bacterial isolation and identification were done using standard conventional methods. Antibiotic susceptibility testing was conducted using the Kirby–Bauer method. Ten phenotypically carbapenem-resistant isolates were further subjected to genotypic analysis (PCR amplification) for the detection of ESBL and carbapenemase gene.

    Results

    A total of 148 Enterobacteriaceae isolates belonging to seven (7) genera were isolated and identified which included E. coli, Enterobacter spp., Klebsiella spp., Salmonella, Citrobacter sp, Proteus, and Shigella. Results showed that 55% of isolates were resistant to tetracycline, 28% to cefepime, the least resistance was shown in moxifloxacin and gentamicin which had 6% and 9%, respectively, of the total isolates. For the two carbapenems used, results showed meropenem and imipenem had resistant values of 14% each, respectively. Two isolates carried the blaCTX-M gene while the carbapenemase gene (blaKPC, blaNDM, and blaOXA) was not detected in all the ten isolates.

    Conclusion

    There was also negative chromosomal detection of carbapenemase in MDR isolates from well waters in Iwo town. Consequently, resistance to carbapenem antibiotics in these isolates may not be mediated by carbapenemase but by the production of extended-spectrum β-lactamases and through other mechanisms of resistance.

    Keywords: Antibiotic resistance, Carbapenem, Enterobacteriaceae, Extended-spectrum β-lactamases, Nigeria, Water quality}
  • Nahid Hosseinzadeh-sohi, Shahin Najar-Peerayeh, Bita Bakhshi*
    Background

    Gastrointestinal colonization with resistant pathogens is significant because they could be easily transmitted to other hosts or spread to different microbiota through mobile genetic elements.

    Objectives

    This study assessed the prevalence of fecal carriage of extended-spectrum β-lactamase-producing and carbapenemaseproducing Enterobacteriaceae (ESBL-E and CPE, respectively) among hemodialysis patients and the factors affecting its occurrence in a hospital in Tehran.

    Methods

    From January 2018 to May 2019, 150 hemodialysis patients referred to a hospital in Tehran were sampled in this study. Stool samples of the patients were diluted in saline and cultured on MacConkey agar plates containing cefotaxime, ceftazidime, imipenem, and meropenem discs. The clinical data were analyzed to identify the risk factors using a logistic regression model.

    Results

    The colonization rate of ESBL-E was 48.6%, while only 2% of patients were identified as the carriers of CPE (3 of 150). A higher prevalence rate was obtained for intestinal carriage of ESBL-E among hemodialysis patients aged 18 to 42 years using multivariate analysis. The prevalence rate of multidrug-resistant isolates was 73.8%. The blaCTX-M1 gene was identified as the most prevalent ESBL gene. Among carbapenemase-encoding genes, blaKPC and blaoxa-48 were found in 12 and two isolates, respectively.

    Conclusions

    These results demonstrated a high prevalence rate of ESBLs among hemodialysis patients, although this rate was low for carbapenemases. Therefore, more control measures should be taken in hospitals to prevent the spread of antibiotic resistance genes in healthcare settings.

    Keywords: Antimicrobial Resistance, Carbapenemase-producing Enterobacteriaceae, Enterobacteriaceae, Extended-spectrumβ-lactamase, Hemodialysis Patients}
  • مهرداد محمدی*، معصومه بیگ، کیمیا باریک رو، سیما سلطانی، لیلا علی نسب مالکی، پارسا ویسی، سمانه تیموری

    در سال های اخیر، عفونت های ناشی از باکتریهای گرم منفی مولد آنزیم های کارباپنماز به یکی از چالش ها و نگرانی های بهداشت جهانی تبدیل شده است. شناسایی سریع و دقیق باکتری های گرم منفی مولد آنزیم کارباپنماز می تواند در کنترل بیماری های عفونی و درمان به موقع آنها موثر واقع شود. طی سال های گذشته، تعداد فزاینده ای از روش های فنوتیپی برای تشخیص سریع فعالیت کارباپنماز باکتری های گرم منفی توسعه یافته است. با این حال، هیچ روش فنوتیپی واحدی برای شناسایی آنزیم های کارباپنماز که دارای حساسیت و اختصاصیت 100% و حاوی همه ویژگی های آزمایش ایده آل باشد، وجود ندارد. انتخاب رویکرد انجام آزمایش مناسب به عوامل مختلفی نظیر وضعیت اپیدمیولوژیک، منابع آزمایشگاهی و در دسترس بودن سایر آزمایش های تاییدی بستگی دارد. مطابق با انچه در این تحقیق بررسی شده است، تست های کاربرپسند، مقرون به صرفه، دقیق و قابل اجرا در آزمایشگاه های میکروب شناسی بالینی وجود دارد. در این مقاله مروری، روش های فنوتیپی مختلف موجود برای تشخیص فعالیت کارباپنماز در باکتری های گرم منفی مورد ارزیابی قرار گرفته است.

    کلید واژگان: کارباپنماز, انتروباکتریاسه, بتالاکتام, مقاومت آنتی بیوتیکی}
    Mehrdad Mohammadi *, Masoumeh Beig, Kimia Barikrou, Sima Soltani, Leila Ali Nasab Maleki, Parsa Veisi, Samane Teymouri

    In recent years, infections caused by gram-negative organisms that produce carbapenemase enzymes (CPO) have become one of the global health challenges and concerns. Rapid and accurate identification of gram-negative organisms that produce the carbapenemase enzyme can be effective in controlling infectious diseases and their timely treatment. Over the years, an increasing number of phenotypic methods have been developed to rapidly detect the activity of gram-negative carbapenemases. However, there is no single phenotypic method that has 100% sensitivity and specificity and contains all the characteristics of an ideal test for the detection of carbapenemase enzymes. The choice of an appropriate methodological approach depends on various factors such as epidemiological status, laboratory resources, and the availability of other confirmatory tests. According to what has been studied in this research, there are user-friendly, cost-effective, accurate, and applicable tests in clinical microbiology laboratories. In this review study, various phenotypic methods have been evaluated for detecting carbapenemase activity in gram-negative bacteria.

    Keywords: Carbapenemase, Enterobacteriaceae, Beta-lactam, Antibiotic resistance}
  • Fatemeh Kavian, Leila Nateghi
    Background and Objectives

    Mahyaveh is a traditional Iranian fish sauce produced by fermentation and hydrolysis. The main production of Mahyaveh has been traditionally and scientific research and industrial measures has not been done on it with the aim to achieve a production with less microbial load. Therefore, the aim of this research was to study the type of fish, salt concentration and fermentation time on the bacterial population of Iranian fish sauce (Mahyaveh).

    Materials and Methods

    For this purpose, the effects of fish type (tuna, anchovy and sardine), salt concentration (15%, 25% and 35%) and fermentation time (30, 75 and 120 days) on the total microbial count, Micrococcus, Enterobacteriaceae and Bacillus were investigated. 15 treatments were designed according to the Box-Behnken Response Surface Methodology.

    Results

    Simultaneous optimization to achieve the minimum total microbial count, Micrococcus, Enterobacteriaceae and Bacillus in the Mahyaveh sauce was obtained with 99.49% desirability at the time of 103.63 days of fermentation with the third type of fish (Sardine) and at a salt concentration of 29.38%.

    Conclusion

    By optimizing the conditions of producing Mahyaveh sauce, fish sauce can be produced with the least amount of microbial load with more health safety.

    Keywords: Mahyaveh, Total microbial count, Micrococcus, Enterobacteriaceae, Bacillus}
  • AliAkbar Karami, Amir Javadi, Sohrab Salehi, Neda Nasirian, Amirhosein Maali, Maryam Bakhshalizadeh Shadkam, Masoumeh Najari, Zahra Rousta, Safar Ali Alizadeh
    Background and Objectives

    Prostatitis affects about 16% of men in their lifetime and sometimes leading to prostate cancer. Bacterial infections are the most common causes of prostatitis. Diagnosis of the causative agents of bacterial prostate infections plays an essential role in timely treating and preventing secondary complications. This study isolated bacterial infectious agents in patients’ surgical prostate and evaluated them by routine and molecular microbiological methods.

    Materials and Methods

    In this cross-sectional study, 72 prostate biopsy specimens were collected from the Orology Departmen of hospitals of Qazvin University of Medical Sciences. All samples were cultured in aerobic and anaerobic conditions. Antibiotic susceptibility test by Kirby-Bauer standard method was performed for all isolated bacteria. In addition, all isolated bacteria were identified using 16S rDNA PCR and sanger sequencing methods. Also, TaqMan real-time PCR was applied to detect Ureaplasm aurealyticum, Mycoplasma hominins, and Mycoplasma genitalium.

    Results

    In conventional culture method, out of 18 positive samples, 15 samples (83.3%) were Gram-negative bacteria and 3 samples (16.6%) were Gram-positive bacteria, containing Escherichia coli (55.5%), Klebsiella pneumoniae (11.1%), Enterobacter cloacae (5.5%), Pseudomonas aeruginosa (11.1%), Staphylococcus aureus (11.1%), and Enterococcus faecalis (5.5%). The results of molecular identification methods were the same as conventional culture results. Also, four patients were Ureaplasm aurealyticum, and three patients were positive for Mycoplasma hominis.

    Conclusion

    Most bacteria isolated from prostate specimens belonged to the Enterobacteriaceae family, especially Escherichia coli, Klebsiella pneumoniae, Enterobacter cloacae. Staphylococcus aureus and Enterococcus faecalis were cocci isolated in the specimens too. Also, Ureaplasma urealyticum, and Mycoplasma hominis were identified in prostatitis.

    Keywords: Prostatitis, Pathogens, Enterobacteriaceae, 16s rDNA, Real-time polymerase chain reaction}
  • Mohammad Hossein Akbari, Ania Ahani Azari*, Leila Fozouni
    Introduction

    This study aimed to determine the frequency of extended-spectrum beta-lactamases (ESBL) and different drug resistance phenotypes in Enterobacteriaceae isolated from clinical specimens in Gonbad-e Kavus, Golestan Province.

    Methods

    220 clinical samples of urine, blood, pus, sputum, CSF, body fluids, and ear and eye discharge were collected during six months from April to September 2021 at a referral hospital. The samples were cultured on blood and MacConkey agar and incubated overnight at 37 °C. Standard biochemical tests and the API20E enteric identification system were used to identify bacteria. The Kirby-Bauer disk diffusion method determined the antibiotic resistance pattern, and the phenotypic confirmatory test was used for detecting ESBL producers.

    Results

    108 Enterobacteriaceae isolates were identified from different clinical specimens out of the samples. The isolates were Escherichia coli (36.1%), Klebsiella pneumonia (25%), Enterobacter cloacae (18.5%), Citrobacter freundii (11.1%) and Proteus mirabilis (9.2%). The highest resistance and susceptibility among the isolates belonged to sulfamethoxazole-trimethoprim (68.5%) and meropenem (11.1%), respectively. The highest prevalence of multidrug-resistant (MDR) and ESBL were observed in E. coli and Proteus mirabilis isolates.

    Conclusions

    In this study, the high frequency of MDR phenotypes in the isolates may suggest an increasing trend of antibiotic resistance in Enterobacteriaceae. This could greatly impact the management and treatment of infections caused by these drug-resistant bacteria. Therefore, infection-control measures and continuous monitoring is recommended for controlling the spread of ESBL-producing strains in different geographical areas.

    Keywords: Beta-lactamases, Drug-resistant, Enterobacteriaceae, Prevalence}
  • Firdaus Hamid*, Munawir Munawir, Aldian Irma Amaruddin, Bramantyas Kusuma Hapsari, AndiRofian Sultan, Dianawaty Amiruddin
    Background

    Fecal carriage of extended-spectrum β-lactamase (ESBL)-producing bacteria is a potential risk for transmission and infection. Genotypes known to be associated with ESBL-producing Enterobacteriaceae are cefotaximases (CTX-M), temoniera (TEM), and sulfhydryl variable (SHV). Unfortunately, data on ESBL prevalence in Indonesia, especially in South Sulawesi, is still limited, so further research on the community is needed.

    Objectives

    This study aimed to investigate the prevalence of fecal carriage of ESBL-producing Enterobacteriaceae among school children in South Sulawesi, Indonesia.

    Methods

    The research was conducted among school-children in South Sulawesi, Indonesia. Detection of ESBL gene using polymerase chain reaction (PCR) methods. A total of 245 stool samples were collected.

    Results

    The prevalence of fecal carriage of ESBL-producing Enterobacteriaceae among school children was 76.7% (188/245). Genotyping of EBSL-producing Enterobacteriaceae encoding genes using PCR found that TEM genes, 92.6% (174/188), were higher than SHV genes, 38.8% (73/188) and CTX-M genes, 4.3% (8/188). It was also revealed a combination of ESBL-producing genes of Enterobacteriaceae. The most combination genes were found in TEM + SHV genes, including 55 of 188 (29.26%).

    Conclusions

    The presence of ESBL gene careers suggests that antibiotic resistance has spread in the community, which needs to be of concern since it can be an ESBL gene reservoir that can be transmitted to many pathogenic bacteria.

    Keywords: Children, Enterobacteriaceae, Extended-Spectrum β-Lactamase, Genotypes, Polymerase Chain Reaction}
  • Razieh Amirfakhrian, Atieh Yaghobi, Roya Saddat Ghaderi, Seyed Isaac Hashemy, Kiarash Ghazvini *
    Introduction

    In recent decades, the inappropriate use of antibiotics and the existence of transferable resistant elements have caused the emergence of multidrug-resistant (MDR) gram-negative organisms. Antimicrobial resistance is becoming one of the major challenges to public health and has caused morbidity and mortality worldwide. The purpose of this study was the assessment of the prevalence and frequency of colistin resistance among gram-negative bacilli (Enterobacteriaceae, Acinetobacter spp., and Pseudomonas spp.) in Iran and around the world.

    Methods

    For this systematic review and meta-analysis, we searched international and national databases, including PubMed, Google Scholar, SID, and Magiran, from 1998 to 2018 for articles and abstracts describing colistin resistance among gram-negative bacilli. We have included 92 studies that met our inclusion criteria, and the outcomes were combined using a random-effects model to derive the event rate of colistin resistance among gram-negative bacilli. Data were analyzed by the Comprehensive Meta-Analysis Software (V2), and the heterogeneity of the studies was assessed using the I2 index.

    Results

    Out of the 11050 papers identified, 92 studies met the strict inclusion criteria and were finally included. The overall event rate of colistin resistance among gram-negative bacilli (GNB) was about 6.6%, while the event rate of colistin resistance among Acinetobacter spp. (n = 18504) was 2.8% (summary: 95% confidence interval (CI): [0.02, 0.041], P = 0.001, I2 = 70, df (Q) = 36, Q-value = 121.924). The colistin resistance among Pseudomonas spp. (n = 15094) was 3% (95% CI: [0.022, 0.041], P = 0.001, I2 = 68.3, df (Q) = 25, Q-value = 85.648), and the colistin resistance among Enterobacteriaceae spp. (n = 44772) was 0.8% (95% CI: [0.004, 0.014], P = 0.001, I2 = 87.6, df (Q) = 15, Q-value = 71.291). Therefore, the event rate of resistance to colistin among GNB was relatively low (6.6%).

    Conclusion

    The event rate of resistance to colistin among GNB was low. Therefore, this antimicrobial agent can still be administered as a suitable option against GNB that are resistant to other antibiotics such as carbapenems.

    Keywords: Acinetobacter spp, Enterobacteriaceae, Colistin, gram-negative rods, Iran, Prevalence, Pseudomonas spp, Resistance}
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